RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 LHX4Q969G2 390 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 FGGYQ96C11 551 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 ELL3Q9HB65 397 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 MTCH1Q9NZJ7 389 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 ONECUT1Q9UBC0 465 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 IGHV1-69DA0A0B4J2H0 117 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 E9PI62 339 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 F8VVB4 439 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 F8VWA3 439 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 CLDN34H7C241 214 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 NXPH2O95156 264 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 SERPINA3P01011 423 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 IGHV1-69P01742 117 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 NDUFB7P17568 137 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 PRDX2P32119 198 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 CEBPDP49716 269 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 COMPP49747 757 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 ACTG1P63261 375 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 SLC9A3R2Q15599 337 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 KLHL22Q53GT1 634 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 UTS2BQ765I0 119 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 VMO1Q7Z5L0 202 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 KIR3DL3Q8N743 410 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 PACRGLQ8N7B6 248 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 GCDHQ92947 438 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 MRPL48Q96GC5 212 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 FGF20Q9NP95 211 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 C8orf4Q9NR00 106 aa15.2■□□□□ 0.02
SHKBP1-202ENST00000593764 LIMS3P0CW19 117 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 LIMS4P0CW20 117 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 ATF1P18846 271 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 DLX1P56177 255 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 ADARB1P78563 741 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 C1orf122Q6ZSJ8 110 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 DNAAF1Q8NEP3 725 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 TMEM185AQ8NFB2 350 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 CNIH3Q8TBE1 160 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 CYGBQ8WWM9 190 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 GATAD2BQ8WXI9 593 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 MYCBPQ99417 103 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 JAM3Q9BX67 310 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 HHLA2Q9UM44 414 aa15.19■□□□□ 0.02
SHKBP1-202ENST00000593764 CASQ2O14958 399 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 ZFPL1O95159 310 aa15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 RNASE1P07998 156 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 PRB3Q04118 309 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 CNN3Q15417 329 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 TTC23Q5W5X9 447 aa15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 METAP1DQ6UB28 335 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 PDZD9Q8IXQ8 264 aa15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 ZNF561Q8N587 486 aa15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 TNFRSF14Q92956 283 aa15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 BORCS8Q96FH0 119 aa15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 CEP19Q96LK0 163 aa15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 ZMAT3Q9HA38 289 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 SIRT7Q9NRC8 400 aa15.18■□□□□ 0.02
SHKBP1-202ENST00000593764 FBN3Q75N90 2809 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 HOXA3O43365 443 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 KNG1P01042 644 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 RBP2P50120 134 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 OGFRL1Q5TC84 451 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 C12orf54Q6X4T0 127 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 Q6YL49 198 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 SLC25A26Q70HW3 274 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 CMTM4Q8IZR5 234 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 DHRSXQ8N5I4 330 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 ZNF676Q8N7Q3 588 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 OR13C3Q8NGS6 347 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 SLAMF9Q96A28 289 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 SLC25A28Q96A46 364 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 UNKLQ9H9P5 680 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 NOX4Q9NPH5 578 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 C19orf12Q9NSK7 152 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 OR14J1Q9UGF5 321 aa15.17■□□□□ 0.02
SHKBP1-202ENST00000593764 TRBV23-1A0A0A0MS06 115 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 A0A1W2PQ09 198 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 RNASEK-C17orf49H0YIS7 233 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 M0R1W7 72 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 SLC1A7O00341 560 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 INMTO95050 263 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 HKR1P10072 659 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 ZNF20P17024 532 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 PRKACBP22694 351 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 AZGP1P25311 298 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 DCKP27707 260 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 ETV1P50549 477 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 GTF2A1P52655 376 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 CAPZA1P52907 286 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 GBX2P52951 348 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 ATP1B3P54709 279 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 MTCP1P56278 107 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 MRPL28Q13084 256 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 CRIP3Q6Q6R5 217 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 RNF144BQ7Z419 303 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 ZDHHC16Q969W1 377 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 PDCD1LG2Q9BQ51 273 aa15.16■□□□□ 0.02
SHKBP1-202ENST00000593764 A0A0U1RQK1 487 aa15.15■□□□□ 0.02
SHKBP1-202ENST00000593764 TMEM212A6NML5 194 aa15.15■□□□□ 0.02
SHKBP1-202ENST00000593764 MT-ND2P03891 347 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms