RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 APLNRP35414 380 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 NOVA1P51513 510 aaKnown RBP15.64■□□□□ 0.09
SMPD3-211ENST00000568373 GMFBP60983 142 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 PRDX4Q13162 271 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 LIN54Q6MZP7 749 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 OVCH2Q7RTZ1 564 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 ZNF611Q8N823 705 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 ZSCAN4Q8NAM6 433 aaPredicted RBP15.64■□□□□ 0.09
SMPD3-211ENST00000568373 SCGB3A2Q96PL1 93 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 HDHD3Q9BSH5 251 aaPredicted RBP15.64■□□□□ 0.09
SMPD3-211ENST00000568373 FAAP24Q9BTP7 215 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 PPA2Q9H2U2 334 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 C5orf66Q9H5L9 145 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 OPA3Q9H6K4 179 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 PQLC2LA1A4F0 135 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 ERVH48-1M5A8F1 160 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 SDCBPO00560 298 aaPredicted RBP15.63■□□□□ 0.09
SMPD3-211ENST00000568373 DUS4LO95620 317 aaKnown RBP15.63■□□□□ 0.09
SMPD3-211ENST00000568373 CST4P01036 141 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 FPR2P25090 351 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 SRSF4Q08170 494 aaKnown RBP15.63■□□□□ 0.09
SMPD3-211ENST00000568373 OPCMLQ14982 345 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 TMEM128Q5BJH2 165 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 PEG10Q86TG7 708 aaKnown RBP15.63■□□□□ 0.09
SMPD3-211ENST00000568373 AK3Q9UIJ7 227 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 OSGIN2Q9Y236 505 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 ST3GAL6Q9Y274 331 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 SPTBN2O15020 2390 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 FXYD6-FXYD2A0A087WZ82 144 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 TM4SF5O14894 197 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 ARPC5O15511 151 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 CEACAM4O75871 244 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 CD8AP01732 235 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 PPP3CBP16298 524 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 SORDQ00796 357 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 AADACL3Q5VUY0 350 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 TMEM185AQ8NFB2 350 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 OR10AD1Q8NGE0 317 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 WBP1Q96G27 269 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 FXYD6Q9H0Q3 95 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 CRIM1Q9NZV1 1036 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 EDARQ9UNE0 448 aa15.63■□□□□ 0.09
SMPD3-211ENST00000568373 IGKV1D-8A0A087WSZ0 117 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 AQP7O14520 342 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 MSTNO14793 375 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 WNT5AP41221 380 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 C1QTNF12Q5T7M4 302 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 SLC25A26Q70HW3 274 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 MDP1Q86V88 176 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 ZDHHC23Q8IYP9 409 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 CASTOR1Q8WTX7 329 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 HPSE2Q8WWQ2 592 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 SULT4A1Q9BR01 284 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 KCNMB2Q9Y691 235 aa15.62■□□□□ 0.09
SMPD3-211ENST00000568373 RFPL4AA6NLU0 287 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 RFPL4AL1F8VTS6 287 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 RRP8O43159 456 aaKnown RBP15.61■□□□□ 0.09
SMPD3-211ENST00000568373 GFRA3O60609 400 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 IFNA7P01567 189 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 DTYMKP23919 212 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 RBM11P57052 281 aaKnown RBP15.61■□□□□ 0.09
SMPD3-211ENST00000568373 RTP5Q14D33 572 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 CEACAM21Q3KPI0 293 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 TFAP2EQ6VUC0 442 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 TMEM230Q96A57 120 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 ZNF75AQ96N20 296 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 TRIB1Q96RU8 372 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 CMSS1Q9BQ75 279 aaKnown RBP15.61■□□□□ 0.09
SMPD3-211ENST00000568373 FGF23Q9GZV9 251 aaPredicted RBP15.61■□□□□ 0.09
SMPD3-211ENST00000568373 FRYQ5TBA9 3013 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 TRAV14DV4A0A0A6YYC5 116 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 CCSO14618 274 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 NOS1APO75052 506 aaPredicted RBP15.61■□□□□ 0.09
SMPD3-211ENST00000568373 WISP2O76076 250 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 C6orf183Q5T699 404 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 GCNT2Q8N0V5 402 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 SLC30A7Q8NEW0 376 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 Q8NFD4 153 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 PDCD10Q9BUL8 212 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 DLL3Q9NYJ7 618 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 ANXA10Q9UJ72 324 aa15.61■□□□□ 0.09
SMPD3-211ENST00000568373 OR5H14A6NHG9 310 aa15.6■□□□□ 0.09
SMPD3-211ENST00000568373 CD300LBA8K4G0 201 aa15.6■□□□□ 0.09
SMPD3-211ENST00000568373 NPBWR2P48146 333 aa15.6■□□□□ 0.09
SMPD3-211ENST00000568373 GPM6AP51674 278 aa15.6■□□□□ 0.09
SMPD3-211ENST00000568373 ARPC4P59998 168 aa15.6■□□□□ 0.09
SMPD3-211ENST00000568373 FGL1Q08830 312 aa15.6■□□□□ 0.09
SMPD3-211ENST00000568373 BAMBIQ13145 260 aa15.6■□□□□ 0.09
SMPD3-211ENST00000568373 IKZF1Q13422 519 aa15.6■□□□□ 0.09
SMPD3-211ENST00000568373 EXOSC2Q13868 293 aaKnown RBP15.6■□□□□ 0.09
SMPD3-211ENST00000568373 FAM214BQ7L5A3 538 aa15.6■□□□□ 0.09
SMPD3-211ENST00000568373 POM121Q96HA1 1249 aa15.6■□□□□ 0.09
SMPD3-211ENST00000568373 RTBDNQ9BSG5 229 aaPredicted RBP15.6■□□□□ 0.09
SMPD3-211ENST00000568373 ZNF629Q9UEG4 869 aaPredicted RBP15.6■□□□□ 0.09
SMPD3-211ENST00000568373 DBX1A6NMT0 343 aa15.59■□□□□ 0.09
SMPD3-211ENST00000568373 PDCD6O75340 191 aa15.59■□□□□ 0.09
SMPD3-211ENST00000568373 FCGR3AP08637 254 aa15.59■□□□□ 0.09
SMPD3-211ENST00000568373 S100A11P31949 105 aa15.59■□□□□ 0.09
SMPD3-211ENST00000568373 TGFBR3Q03167 851 aa15.59■□□□□ 0.09
SMPD3-211ENST00000568373 GUSBP1Q15486 140 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms