RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TIGD4Q8IY51 512 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF440Q8IYI8 595 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 TMEM99Q8N816 258 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 OR10Z1Q8NGY1 313 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 OR6K3Q8NGY3 331 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 CCL4L1Q8NHW4 92 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 CDS1Q92903 461 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 HIST1H2ACQ93077 130 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 HAVCR1Q96D42 359 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 SGTBQ96EQ0 304 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 CNRIP1Q96F85 164 aaPredicted RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 C4orf36Q96KX1 117 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 PRSS27Q9BQR3 290 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF426Q9BUY5 554 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 REG4Q9BYZ8 158 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 RERGLQ9H628 205 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 METTL17Q9H7H0 456 aaPredicted RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 KIR3DX1Q9H7L2 352 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 OR6C2Q9NZP2 312 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 SIGLEC7Q9Y286 467 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 SPEGQ15772 3267 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ANKRD17O75179 2603 aaKnown RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 TNRC6AQ8NDV7 1962 aaKnown RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 UNC79Q9P2D8 2635 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 CFAP46Q8IYW2 2715 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 USP9YO00507 2555 aaPredicted RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 A0A0A6YYH2 397 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 A6NJ64 397 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 IFITM5A6NNB3 132 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 SMLR1H3BR10 107 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 TOR1AO14656 332 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 MLNRO43193 412 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ERI3O43414 337 aaKnown RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 NDUFA2O43678 99 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 LYPD3O95274 346 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 AMBPP02760 352 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ATF1P18846 271 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 AK4P27144 223 aaPredicted RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 GPR4P46093 362 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 OR3A1P47881 315 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 SLC25A1P53007 311 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF345Q14585 488 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 OR1Q1Q15612 314 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 NDUFAF6Q330K2 333 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 CLVS2Q5SYC1 327 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 SIGLEC15Q6ZMC9 328 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 DPY19L2P2Q6ZN68 376 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 PGAP1Q75T13 922 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 SLC35F2Q8IXU6 374 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 BBS1Q8NFJ9 593 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 OR11G2Q8NGC1 345 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 OR4K14Q8NGD5 310 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 OR2A1Q8NGT9 310 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 OR51Q1Q8NH59 317 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 GPR148Q8TDV2 347 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 THEM6Q8WUY1 208 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 GHSRQ92847 366 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 BPIFA2Q96DR5 249 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 C12orf66Q96MD2 445 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 FAM218AQ96MZ4 157 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 PRAP1Q96NZ9 151 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 TGM7Q96PF1 710 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 GPX7Q96SL4 187 aaPredicted RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 WFDC6Q9BQY6 131 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 SLC7A5P2Q9GIP4 190 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ISG20L2Q9H9L3 353 aaKnown RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 NOX3Q9HBY0 568 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 FAM212BQ9NTI7 297 aaPredicted RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 PLEKHA6Q9Y2H5 1048 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF835Q9Y2P0 537 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 MRPS2Q9Y399 296 aaKnown RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 COLEC10Q9Y6Z7 277 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 V9GY05 133 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 SPTAN1Q13813 2472 aaKnown RBP3.53□□□□□ -1.84
LINC00561-201ENST00000565815 DOPEY1Q5JWR5 2465 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 A0A0B4J2E0 115 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 TRGV8A0A0C4DH27 118 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 A0A1B0GX12 115 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 A0A1W2PR80 420 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 ACOD1A6NK06 481 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 G3V3Q6 166 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 J3QLW9 94 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 CTNSO60931 367 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 NDUFB2O95178 105 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 RLN1P04808 185 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 CD3GP09693 182 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 GABRA1P14867 456 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 MGMTP16455 207 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF19P17023 458 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 CXCL3P19876 107 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 DRD5P21918 477 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 DPP4P27487 766 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 PYCR1P32322 319 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 TDGF1P3P51864 188 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 ACTBP60709 375 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 PRPS1P60891 318 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 ACTG1P63261 375 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 SLC3A1Q07837 685 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 CRMP1Q14194 572 aa3.53□□□□□ -1.84
LINC00561-201ENST00000565815 PON3Q15166 354 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms