RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 LANCL3Q6ZV70 420 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 ZNF700Q9H0M5 742 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 PRTFDC1Q9NRG1 225 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 FOXD3Q9UJU5 478 aaPredicted RBP14.3□□□□□ -0.12
LINC00554-201ENST00000564841 MYO7BQ6PIF6 2116 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 RBFOX3A6NFN3 312 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 SEC11BP0C7V7 166 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 PGA3P0DJD8 388 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 OMGP23515 440 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 TMEM176BQ3YBM2 270 aaPredicted RBP14.29□□□□□ -0.12
LINC00554-201ENST00000564841 C1orf140Q5VVS0 124 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 C16orf47Q6ZP98 133 aaPredicted RBP14.29□□□□□ -0.12
LINC00554-201ENST00000564841 NPRL2Q8WTW4 380 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 PTX4Q96A99 478 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 WFIKKN1Q96NZ8 548 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 LMF2Q9BU23 707 aaKnown RBP14.29□□□□□ -0.12
LINC00554-201ENST00000564841 FAM221AA4D161 298 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 H0YIG0 161 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 HIST1H1DP16402 221 aaKnown RBP14.29□□□□□ -0.12
LINC00554-201ENST00000564841 FUT3P21217 361 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 THRSPQ92748 146 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 FAM210BQ96KR6 192 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 NDUFAF3Q9BU61 184 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 CBLN4Q9NTU7 201 aa14.29□□□□□ -0.12
LINC00554-201ENST00000564841 CCDC163A0A0D9SF12 145 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 CRTAPO75718 401 aaPredicted RBP14.28□□□□□ -0.12
LINC00554-201ENST00000564841 PAX1P15863 534 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 ARL4DP49703 201 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 AFF3P51826 1226 aaKnown RBP14.28□□□□□ -0.12
LINC00554-201ENST00000564841 RAB38P57729 211 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 CLEC12BQ2HXU8 276 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 VAX1Q5SQQ9 334 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 LHFPL1Q86WI0 220 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 SLC22A24Q8N4F4 322 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 CUTCQ9NTM9 273 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 B3GALT5Q9Y2C3 310 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 BDP1A6H8Y1 2624 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 TMEM14DPA8MWL7 114 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 TNFSF12O43508 249 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 MBP02144 154 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 MMP9P14780 707 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 IL11P20809 199 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 LMO1P25800 156 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 HIKESHIQ53FT3 197 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 HIST2H3PS2Q5TEC6 136 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 TCEAL6Q6IPX3 200 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 MAMDC2Q7Z304 686 aaPredicted RBP14.28□□□□□ -0.12
LINC00554-201ENST00000564841 LYZL2Q7Z4W2 148 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 OR52M1Q8NGK5 317 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 GPR119Q8TDV5 335 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 TSLPQ969D9 159 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 HDHD3Q9BSH5 251 aaPredicted RBP14.28□□□□□ -0.12
LINC00554-201ENST00000564841 LANCL2Q9NS86 450 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 A8MVM7 634 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 MKRN2OSH3BPM6 223 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 SYT7O43581 403 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 IGLV3-19P01714 112 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 SRP19P09132 144 aaKnown RBP14.28□□□□□ -0.12
LINC00554-201ENST00000564841 CXCR1P25024 350 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 FOXO1Q12778 655 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 C1orf189Q5VU69 101 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 CPEB2Q7Z5Q1 589 aaKnown RBP14.28□□□□□ -0.12
LINC00554-201ENST00000564841 COMMD1Q8N668 190 aa14.28□□□□□ -0.12
LINC00554-201ENST00000564841 NXF5Q9H1B4 397 aaKnown RBP14.28□□□□□ -0.12
LINC00554-201ENST00000564841 ZNF701Q9NV72 531 aaPredicted RBP14.28□□□□□ -0.12
LINC00554-201ENST00000564841 HCRTR2O43614 444 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 AMBPP02760 352 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 TTRP02766 147 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 OPN1LWP04000 364 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 P2RY1P47900 373 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 SPSB3Q6PJ21 355 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 COMMD2Q86X83 199 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 NKAIN3Q8N8D7 197 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 GINS3Q9BRX5 216 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 ARV1Q9H2C2 271 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 MRPS28Q9Y2Q9 187 aaKnown RBP14.27□□□□□ -0.12
LINC00554-201ENST00000564841 KCNIP3Q9Y2W7 256 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 TMED3Q9Y3Q3 217 aa14.27□□□□□ -0.12
LINC00554-201ENST00000564841 SHANK1Q9Y566 2161 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 COL4A2P08572 1712 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 A0A1W2PR77 199 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 TLCD2A6NGC4 264 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 C17orf105B2RV13 164 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 AHSA1O95433 338 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 BPNT1O95861 308 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 NPSP0C0P6 89 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 OR4A8P0C604 315 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 PNMTP11086 282 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 TBPP20226 339 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 CAPZBP47756 277 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 EMC4Q5J8M3 183 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 C1QL2Q7Z5L3 287 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.27□□□□□ -0.13
LINC00554-201ENST00000564841 M1APQ8TC57 530 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 OR51E1Q8TCB6 317 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 C1orf123Q9NWV4 160 aa14.27□□□□□ -0.13
LINC00554-201ENST00000564841 BORCS7-ASMTA0A0B4J1R7 106 aa14.26□□□□□ -0.13
LINC00554-201ENST00000564841 K7N7A8 449 aa14.26□□□□□ -0.13
LINC00554-201ENST00000564841 PDGFBP01127 241 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms