RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 IGKV1D-17A0A075B6S4 117 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 TMEM178BH3BS89 294 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 M0R233 179 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 RAB27BO00194 218 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 WNT9BO14905 357 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 CASKO14936 926 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 AKR7A2O43488 359 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 CLPXO76031 633 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 IGHV4-39P01824 125 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 ELK1P19419 428 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 COL8A2P25067 703 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 GIFP27352 417 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 HAAOP46952 286 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 PTH2RP49190 550 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 FGF12P61328 243 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 PCGF3Q3KNV8 242 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 ZNF404Q494X3 552 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 GLIPR1L1Q6UWM5 242 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 CMTM4Q8IZR5 234 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 OR51D1Q8NGF3 324 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 ERGIC1Q969X5 290 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 SLAMF9Q96A28 289 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 DACT3Q96B18 629 aaPredicted RBP5.66□□□□□ -1.5
LINC00517-202ENST00000554257 POM121Q96HA1 1249 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 GHRLQ9UBU3 117 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 DUSP13Q9UII6 198 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 MRPS28Q9Y2Q9 187 aaKnown RBP5.66□□□□□ -1.5
LINC00517-202ENST00000554257 FAM230AA0A1W2PPH8 454 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 SPRY3O43610 288 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 ANGPTL7O43827 346 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 HPGDSO60760 199 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 NDUFS7O75251 213 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 COX6B1P14854 86 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 MTCP1P56278 107 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 RBM11P57052 281 aaKnown RBP5.66□□□□□ -1.5
LINC00517-202ENST00000554257 RAB11BQ15907 218 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 UBE2NLQ5JXB2 153 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 CD177Q8N6Q3 437 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 ZNF671Q8TAW3 534 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 ACOT12Q8WYK0 555 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 ST8SIA4Q92187 359 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 SEH1LQ96EE3 360 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 C1orf159Q96HA4 380 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 DCUN1D5Q9BTE7 237 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 SHARPINQ9H0F6 387 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 MMP27Q9H306 513 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 TPK1Q9H3S4 243 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 CKLFQ9UBR5 152 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 DAPK2Q9UIK4 370 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 ITPR2Q14571 2701 aa5.66□□□□□ -1.5
LINC00517-202ENST00000554257 PRRC2AP48634 2157 aaKnown RBP5.65□□□□□ -1.5
LINC00517-202ENST00000554257 LRRK2Q5S007 2527 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 CDIPTO14735 213 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 F12P00748 615 aaPredicted RBP5.65□□□□□ -1.5
LINC00517-202ENST00000554257 ATP1B3P54709 279 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 PIGYQ3MUY2 71 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 ATPAF1Q5TC12 328 aaPredicted RBP5.65□□□□□ -1.5
LINC00517-202ENST00000554257 AGAP6Q5VW22 663 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 GLT8D1Q68CQ7 371 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 OR10K2Q6IF99 312 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 HAGHLQ6PII5 290 aaPredicted RBP5.65□□□□□ -1.5
LINC00517-202ENST00000554257 ZNF841Q6ZN19 808 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 FAM90A1Q86YD7 464 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 ZNF573Q86YE8 665 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 FTMTQ8N4E7 242 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 OR5D18Q8NGL1 313 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 MARVELD3Q96A59 401 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 GSX2Q9BZM3 304 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 WDR13Q9H1Z4 485 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 RASL12Q9NYN1 266 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 METRNQ9UJH8 293 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 FBXO9Q9UK97 447 aaPredicted RBP5.65□□□□□ -1.5
LINC00517-202ENST00000554257 SPTBN1Q01082 2364 aaKnown RBP5.65□□□□□ -1.5
LINC00517-202ENST00000554257 TRAV24A0A0B4J272 114 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 A0A1B0GW55 424 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 ANXA2P2A6NMY6 339 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 MFNGO00587 321 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 ZNF737O75373 536 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 HLA-DQB1P01920 261 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 TFF1P04155 84 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 MELTFP08582 738 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 UBBP0CG47 229 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 DUX4L2P0CJ85 424 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 DUX4L3P0CJ86 424 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 DUX4L4P0CJ87 422 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 DUX4L5P0CJ88 424 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 DUX4L6P0CJ89 424 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 DUX4L7P0CJ90 424 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 PSMD7P51665 324 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 BMXP51813 675 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 PPP3R1P63098 170 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 TNFAIP6P98066 277 aaPredicted RBP5.65□□□□□ -1.5
LINC00517-202ENST00000554257 ZNF880Q6PDB4 577 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 DUX4L9Q6RFH8 374 aaPredicted RBP5.65□□□□□ -1.5
LINC00517-202ENST00000554257 SLC25A26Q70HW3 274 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 TCF23Q7RTU1 214 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 FBXL14Q8N1E6 418 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 ANGPTL6Q8NI99 470 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 BORCS8Q96FH0 119 aa5.65□□□□□ -1.5
LINC00517-202ENST00000554257 CACNG6Q9BXT2 260 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms