RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 ZNF471Q9BX82 626 aaPredicted RBP16.05■□□□□ 0.16
PRPF40B-208ENST00000548436 PFDN2Q9UHV9 154 aa16.05■□□□□ 0.16
PRPF40B-208ENST00000548436 GEMIN2O14893 280 aaKnown RBP16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 RRP8O43159 456 aaKnown RBP16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 CHATP28329 748 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 FUT6P51993 359 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 PDZK1IP1Q13113 114 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 PLCXD3Q63HM9 321 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 INO80EQ8NBZ0 244 aaPredicted RBP16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 DYRK2Q92630 601 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 LINC00052Q96N35 136 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 ZNF2Q9BSG1 426 aaPredicted RBP16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 PRDM14Q9GZV8 571 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 RASL12Q9NYN1 266 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 ANXA10Q9UJ72 324 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 PCNX2A6NKB5 2137 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 ZNF816-ZNF321PA0A0X1KG74 233 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 ZSCAN5BA6NJL1 495 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 H0YIZ8 118 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 XRCC2O43543 280 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 TNFSF15O95150 251 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 KNG1P01042 644 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 SFTPBP07988 381 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 ARPC4P59998 168 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 CYCSP99999 105 aaKnown RBP16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 AIMP2Q13155 320 aaKnown RBP16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 SURF2Q15527 256 aaPredicted RBP16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 BRICD5Q6PL45 260 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 COLCA1Q6ZS62 124 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 SLC25A32Q9H2D1 315 aa16.04■□□□□ 0.16
PRPF40B-208ENST00000548436 TRBV6-7A0A0A0MS04 114 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 SYNGR4O95473 234 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 PGAM2P15259 253 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 OPRM1P35372 400 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 PTGER4P35408 488 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 HES3Q5TGS1 186 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 FBXL14Q8N1E6 418 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 OSR2Q8N2R0 312 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 BHLHE23Q8NDY6 225 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 OR10AD1Q8NGE0 317 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 SUN5Q8TC36 379 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 OR10C1Q96KK4 312 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 CMSS1Q9BQ75 279 aaKnown RBP16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 LIME1Q9H400 295 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 PARPBPQ9NWS1 579 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 NUP50Q9UKX7 468 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 SLC7A11Q9UPY5 501 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 DOCK7Q96N67 2140 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 ZNF503-AS2A6NEH8 195 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 A8MXK9 166 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 RPL36A-HNRNPH2H7BZ11 118 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 PLGLB1Q02325 96 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 C3AR1Q16581 482 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 CALHM1Q8IU99 346 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 PXT1Q8NFP0 134 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 DCUN1D4Q92564 292 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 RRNAD1Q96FB5 475 aaKnown RBP16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 EDARQ9UNE0 448 aa16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 C14orf166Q9Y224 244 aaKnown RBP16.03■□□□□ 0.16
PRPF40B-208ENST00000548436 LGALS8O00214 317 aa16.02■□□□□ 0.15
PRPF40B-208ENST00000548436 HLA-HP01893 362 aa16.02■□□□□ 0.15
PRPF40B-208ENST00000548436 FCGR3AP08637 254 aa16.02■□□□□ 0.15
PRPF40B-208ENST00000548436 FGF2P09038 288 aa16.02■□□□□ 0.15
PRPF40B-208ENST00000548436 CCL2P13500 99 aa16.02■□□□□ 0.15
PRPF40B-208ENST00000548436 ZP3P21754 424 aa16.02■□□□□ 0.15
PRPF40B-208ENST00000548436 OR51F2Q8NH61 342 aa16.02■□□□□ 0.15
PRPF40B-208ENST00000548436 METTL8Q9H825 291 aaKnown RBP16.02■□□□□ 0.15
PRPF40B-208ENST00000548436 IL36GQ9NZH8 169 aa16.02■□□□□ 0.15
PRPF40B-208ENST00000548436 ST3GAL6Q9Y274 331 aa16.02■□□□□ 0.15
PRPF40B-208ENST00000548436 ZNF850A8MQ14 1090 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 CCNOP22674 350 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 PDCD1Q15116 288 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 UNQ6126/PRO20091Q6UXV3 157 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 DHRS9Q9BPW9 319 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 ARPC5LQ9BPX5 153 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 COL25A1Q9BXS0 654 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 PRRG4Q9BZD6 226 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 BCO1Q9HAY6 547 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 ATPIF1Q9UII2 106 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 GPR160Q9UJ42 338 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 F5H0A9 414 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 SP1P08047 785 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 OR5H8P0DN80 308 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 DTYMKP23919 212 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 MEOX1P50221 254 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 FAM219AQ8IW50 185 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 BVESQ8NE79 360 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 FAM117AQ9C073 453 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 DECR2Q9NUI1 292 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 SESN1Q9Y6P5 492 aa16.01■□□□□ 0.15
PRPF40B-208ENST00000548436 FAM221AA4D161 298 aa16■□□□□ 0.15
PRPF40B-208ENST00000548436 ZNF205O95201 554 aa16■□□□□ 0.15
PRPF40B-208ENST00000548436 HOXB5P09067 269 aa16■□□□□ 0.15
PRPF40B-208ENST00000548436 DAZAP2Q15038 168 aaPredicted RBP16■□□□□ 0.15
PRPF40B-208ENST00000548436 TUSC1Q2TAM9 212 aa16■□□□□ 0.15
PRPF40B-208ENST00000548436 HSD17B13Q7Z5P4 300 aaPredicted RBP16■□□□□ 0.15
PRPF40B-208ENST00000548436 BATF2Q8N1L9 274 aa16■□□□□ 0.15
PRPF40B-208ENST00000548436 MDS2Q8NDY4 140 aa16■□□□□ 0.15
PRPF40B-208ENST00000548436 MRPS24Q96EL2 167 aaKnown RBP16■□□□□ 0.15
PRPF40B-208ENST00000548436 PHYHIPLQ96FC7 376 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms