RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 OR2AT4A6NND4 320 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 C22orf46C9J442 243 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 DVL1O14640 695 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 ALX3O95076 343 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 PSG2P11465 335 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 SRD5A1P18405 259 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 ATP1B3P54709 279 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 ASPHD2Q6ICH7 369 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 ZNF788Q6ZQV5 615 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 LHFPL2Q6ZUX7 228 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 SLC36A1Q7Z2H8 476 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 PRIMA1Q86XR5 153 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 OR5D14Q8NGL3 314 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 RAB40AQ8WXH6 277 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 OPALINQ96PE5 141 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 GAFA1Q96PS6 74 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 C7orf69Q9H7B7 122 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 ZNF222Q9UK12 451 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 LSM2Q9Y333 95 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 IGKV1D-17A0A075B6S4 117 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 TRBV5-5A0A0J9YX44 114 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 PLATP00750 562 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 SELLP14151 372 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 MTCP1P56278 107 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 RPS11P62280 158 aaKnown RBP eCLIP18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 PAX8Q06710 450 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 SMIM21Q3B7S5 101 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 ZNF529Q6P280 563 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 CRIP3Q6Q6R5 217 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 SLC25A26Q70HW3 274 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 RNF144BQ7Z419 303 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 BATF2Q8N1L9 274 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 FGFRL1Q8N441 504 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 OR13C5Q8NGS8 318 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 MND1Q9BWT6 205 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 MTCH1Q9NZJ7 389 aa18.86■□□□□ 0.61
SFSWAP-204ENST00000535399 KIR2DS1A0A191URI9 304 aa18.85■□□□□ 0.61
SFSWAP-204ENST00000535399 NKX6-3A6NJ46 265 aa18.85■□□□□ 0.61
SFSWAP-204ENST00000535399 SIGLEC5O15389 551 aa18.85■□□□□ 0.61
SFSWAP-204ENST00000535399 SULT1B1O43704 296 aa18.85■□□□□ 0.61
SFSWAP-204ENST00000535399 NXPH2O95156 264 aa18.85■□□□□ 0.61
SFSWAP-204ENST00000535399 SRP14P37108 136 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-204ENST00000535399 RBM48Q5RL73 367 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-204ENST00000535399 SLAMF9Q96A28 289 aa18.85■□□□□ 0.61
SFSWAP-204ENST00000535399 SPACA5Q96QH8 159 aa18.85■□□□□ 0.61
SFSWAP-204ENST00000535399 OR5M11Q96RB7 305 aa18.85■□□□□ 0.61
SFSWAP-204ENST00000535399 NUDT16L1Q9BRJ7 211 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-204ENST00000535399 PNMA8CA0A1B0GUJ8 204 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 RFPL4AA6NLU0 287 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 RFPL4AL1F8VTS6 287 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 F8VVB4 439 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 F8VWA3 439 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 RGS10O43665 173 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 CD1AP06126 327 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 OCM2P0CE71 109 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 GABRA2P47869 451 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 POU3F4P49335 361 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 BDH1Q02338 343 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 ACSM1Q08AH1 577 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 IKZF1Q13422 519 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 DGUOKQ16854 277 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 YIF1BQ5BJH7 314 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 CD276Q5ZPR3 534 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 TMEM106AQ96A25 262 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 CEP19Q96LK0 163 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 NEK6Q9HC98 313 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 TAS2R4Q9NYW5 299 aa18.84■□□□□ 0.61
SFSWAP-204ENST00000535399 DENRO43583 198 aaKnown RBP18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 NDUFB3O43676 98 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 ENSAO43768 121 aaKnown RBP18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 CD2P06729 351 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 OCMP0CE72 109 aaPredicted RBP18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 CELP19835 753 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 IL13RA1P78552 427 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 PDZK1IP1Q13113 114 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 SPHARQ15513 63 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 C11orf91Q3C1V1 193 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 BTNL3Q6UXE8 466 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 C1QL2Q7Z5L3 287 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 CD177Q8N6Q3 437 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 OR51A2Q8NGJ7 313 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 ST8SIA4Q92187 359 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 RFT1Q96AA3 541 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 SDSLQ96GA7 329 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 MED30Q96HR3 178 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 MRI1Q9BV20 369 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 MAB21L2Q9Y586 359 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 AUP1Q9Y679 476 aa18.83■□□□□ 0.6
SFSWAP-204ENST00000535399 FSHBP01225 129 aa18.82■□□□□ 0.6
SFSWAP-204ENST00000535399 ADRA2CP18825 462 aa18.82■□□□□ 0.6
SFSWAP-204ENST00000535399 RAB3AP20336 220 aa18.82■□□□□ 0.6
SFSWAP-204ENST00000535399 LRRC10Q5BKY1 277 aa18.82■□□□□ 0.6
SFSWAP-204ENST00000535399 BTN2A1Q7KYR7 527 aa18.82■□□□□ 0.6
SFSWAP-204ENST00000535399 PRSS48Q7RTY5 328 aa18.82■□□□□ 0.6
SFSWAP-204ENST00000535399 MKXQ8IYA7 352 aa18.82■□□□□ 0.6
SFSWAP-204ENST00000535399 TEX29Q8N6K0 151 aa18.82■□□□□ 0.6
SFSWAP-204ENST00000535399 Q9H521 79 aa18.82■□□□□ 0.6
SFSWAP-204ENST00000535399 MXRA5Q9NR99 2828 aa18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 TRBV5-7A0A0A0MS05 114 aa18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 IGKV1-12A0A0C4DH73 117 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms