RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 NRIP3Q9NQ35 241 aa7.61□□□□□ -1.19
LIMCH1-209ENST00000509277 HIVEP3Q5T1R4 2406 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 C7orf77A4D0Y5 90 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF729A6NN14 1252 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 FTCDNL1E5RQL4 147 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 GABARAPH6UMI1 98 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 NPIPB7O75200 414 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 IFNA17P01571 189 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 CRYABP02511 175 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 THBS2P35442 1172 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 RPL29P47914 159 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 GNG10P50151 68 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 PRSS12P56730 875 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 STEAP1BQ6NZ63 245 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF343Q6P1L6 599 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF705AQ6ZN79 300 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 Q6ZRG5 221 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 Q6ZS92 163 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 MEPCEQ7L2J0 689 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 PRR7Q8TB68 274 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 MARS2Q96GW9 593 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 OXGR1Q96P68 337 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 TMPRSS5Q9H3S3 457 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 KCNJ16Q9NPI9 418 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 LSM5Q9Y4Y9 91 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 IGSF10Q6WRI0 2623 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 IGLV3-32A0A0A0MS00 114 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 TMEM272A0A1B0GTI8 110 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 A6NNC1 897 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 AP4M1O00189 453 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 NDUFB6O95139 128 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 SLC2A1P11166 492 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 HTR1FP30939 366 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 EFNB2P52799 333 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 GFRA1P56159 465 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 CLDN18P56856 261 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF239Q16600 458 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 UBE2NLQ5JXB2 153 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 BAIAP2L2Q6UXY1 529 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 TPRA1Q86W33 373 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 BAP18Q8IXM2 172 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 OR6K3Q8NGY3 331 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 CPNE4Q96A23 557 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 BSCL2Q96G97 398 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 PARPBPQ9NWS1 579 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 CGGBP1Q9UFW8 167 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 LAMP5Q9UJQ1 280 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 ZDHHC8Q9ULC8 765 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 HSF4Q9ULV5 492 aa7.6□□□□□ -1.19
LIMCH1-209ENST00000509277 A0A0D9SG52 128 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 PRSS37A4D1T9 235 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 AQP7P3A6NL99 342 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 PRRG2O14669 202 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 UPK3AO75631 287 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 ADAP1O75689 374 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 IGHV2-70P01814 119 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 HPNP05981 417 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 FBP1P09467 338 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 CD79AP11912 226 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 MAPK3P27361 379 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 SLC6A9P48067 706 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 FAM220AQ7Z4H9 259 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 OR2G2Q8NGZ5 317 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 TMEM106AQ96A25 262 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 ELOVL1Q9BW60 279 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 RCL1Q9Y2P8 373 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 SPG11Q96JI7 2443 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 TUBAL3A6NHL2 446 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 RFPL4AA6NLU0 287 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 IFITM5A6NNB3 132 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 UMAD1C9J7I0 102 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 RFPL4AL1F8VTS6 287 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 CYB5BO43169 146 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 LYZL6O75951 148 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 OR2C1O95371 312 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 HOXB1P14653 301 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 RAB5AP20339 215 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 DDTP30046 118 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 GNALP38405 381 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 FHITP49789 147 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 FOXG1P55316 489 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 TMEM44Q2T9K0 475 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 CEACAM16Q2WEN9 425 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 FJX1Q86VR8 437 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 NPEPL1Q8NDH3 523 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 FGF20Q9NP95 211 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 NPDC1Q9NQX5 325 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 ABRACLQ9P1F3 81 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 OSGIN2Q9Y236 505 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 SPENQ96T58 3664 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 BCL2L11O43521 198 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 IFNA10P01566 189 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 SBK2P0C263 348 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 OR8U8P0C7N1 319 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF17P17021 662 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 SERPINA2P20848 420 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 PMPCAQ10713 525 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 DHRS2Q13268 280 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 MRPL49Q13405 166 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms