RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 MRPL28Q13084 256 aaKnown RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 AWAT1Q58HT5 328 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 TMEM42Q69YG0 159 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 C16orf87Q6PH81 154 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 DUX4L9Q6RFH8 374 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 ACP7Q6ZNF0 438 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 SLC25A26Q70HW3 274 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 GDPD3Q7L5L3 318 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 EGFL6Q8IUX8 553 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 MKXQ8IYA7 352 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 Q8IYB0 196 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 BATF2Q8N1L9 274 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 FGFRL1Q8N441 504 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 TMEM86BQ8N661 226 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 OR2G2Q8NGZ5 317 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 HAVCR2Q8TDQ0 301 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 CYGBQ8WWM9 190 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 EMG1Q92979 244 aaKnown RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 UBE2FQ969M7 185 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 SLAMF9Q96A28 289 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 LGALS12Q96DT0 336 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 CPNE2Q96FN4 548 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 C4orf36Q96KX1 117 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 CEP19Q96LK0 163 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 ZNF48Q96MX3 618 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 NRIP2Q9BQI9 281 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 CHST5Q9GZS9 411 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 FGF23Q9GZV9 251 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 VCXQ9H320 206 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 ELL3Q9HB65 397 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 INPP5EQ9NRR6 644 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 CHCHD3Q9NX63 227 aaKnown RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 SMPD3Q9NY59 655 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 DUX4Q9UBX2 424 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 HHLA2Q9UM44 414 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 SF3B6Q9Y3B4 125 aaKnown RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 POMT1Q9Y6A1 747 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 ARHGAP32A7KAX9 2087 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 IGKV1D-17A0A075B6S4 117 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 A0A0U1RQK1 487 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 NPFFO15130 113 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 MAGEB3O15480 346 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 ANGPTL7O43827 346 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 NOS1APO75052 506 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-232ENST00000489053 KNG1P01042 644 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 TFF1P04155 84 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 MELTFP08582 738 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 HCKP08631 526 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 CCDC159P0C7I6 412 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 DBTP11182 482 aaKnown RBP7.52□□□□□ -1.21
HDAC6-232ENST00000489053 MMP9P14780 707 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 GABRR1P24046 479 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 EDDM3BP56851 147 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 OR12D2P58182 307 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 ZNF85Q03923 595 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 RAB40BQ12829 278 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 IL24Q13007 206 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 SHISA2Q6UWI4 295 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 TMPRSS11AQ6ZMR5 421 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 GDPGP1Q6ZNW5 385 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 C17orf107Q6ZR85 190 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 LHFPL2Q6ZUX7 228 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 KRT74Q7RTS7 529 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 LHFPL3Q86UP9 236 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 ANGPTL5Q86XS5 388 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 ENTHD1Q8IYW4 607 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 RDH10Q8IZV5 341 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 PRSS35Q8N3Z0 413 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 LY6G5BQ8NDX9 201 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 SETD9Q8NE22 299 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 OR4F5Q8NH21 305 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 SGMS2Q8NHU3 365 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 PPP1R35Q8TAP8 253 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 SPSB1Q96BD6 273 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 FGGYQ96C11 551 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 SDSLQ96GA7 329 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 RDH12Q96NR8 316 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 MBOAT4Q96T53 435 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 FAM234AQ9H0X4 552 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 HEXA-AS1Q9H8Q6 139 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 BEX1Q9HBH7 125 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 AMBNQ9NP70 447 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 C8orf4Q9NR00 106 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 DHDHQ9UQ10 334 aa7.52□□□□□ -1.21
HDAC6-232ENST00000489053 SOX21Q9Y651 276 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-232ENST00000489053 A0A1B0GUS0 222 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 FAM181BA6NEQ2 426 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 TMEM212A6NML5 194 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 CD2P06729 351 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 CHRM2P08172 466 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 PIPP12273 146 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-232ENST00000489053 MPZP25189 248 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 AZGP1P25311 298 aaKnown RBP7.51□□□□□ -1.21
HDAC6-232ENST00000489053 KIR3DL2P43630 455 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 CEBPDP49716 269 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-232ENST00000489053 CCR9P51686 369 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 SNU13P55769 128 aaKnown RBP7.51□□□□□ -1.21
HDAC6-232ENST00000489053 RAG2P55895 527 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 ALKBH1Q13686 389 aaKnown RBP7.51□□□□□ -1.21
HDAC6-232ENST00000489053 GALEQ14376 348 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms