RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 OR2A4O95047 310 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 TDP2O95551 362 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 IGKV1D-33P01593 117 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 IGKV1-33P01594 117 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 P01737 135 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 HTR2CP28335 458 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 MAGEA3P43357 314 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 EMP2P54851 167 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 C21orf59P57076 290 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 TAS2R39P59534 338 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 RPL10AP62906 217 aaKnown RBP0.34□□□□□ -2.36
CCDC93-209ENST00000488908 ITIH4Q14624 930 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 ARMC12Q5T9G4 340 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 TWF2Q6IBS0 349 aaKnown RBP0.34□□□□□ -2.36
CCDC93-209ENST00000488908 SSX9Q7RTT3 188 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 TCF23Q7RTU1 214 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 RBM45Q8IUH3 476 aaKnown RBP0.34□□□□□ -2.36
CCDC93-209ENST00000488908 APRG1Q8IVJ8 170 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 MSRB3Q8IXL7 192 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 ZFP82Q8N141 532 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 GABRG1Q8N1C3 465 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 ITFG1Q8TB96 612 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 UBE2WQ96B02 151 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 FXYD5Q96DB9 178 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 JSRP1Q96MG2 331 aaPredicted RBP0.34□□□□□ -2.36
CCDC93-209ENST00000488908 OR2A7Q96R45 310 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 B9D2Q9BPU9 175 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 AGMATQ9BSE5 352 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 SLC19A3Q9BZV2 496 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 ARV1Q9H2C2 271 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 RBM22Q9NW64 420 aaKnown RBP eCLIP0.34□□□□□ -2.36
CCDC93-209ENST00000488908 ASB3Q9Y575 518 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 OTOFQ9HC10 1997 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 NINLQ9Y2I6 1382 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 A0A1W2PQL4 384 aaPredicted RBP0.33□□□□□ -2.36
CCDC93-209ENST00000488908 A8MWP4 228 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 F5H5T6 163 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 PLPP3O14495 311 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 BCKDKO14874 412 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 ZBTB5O15062 677 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 NDUFS5O43920 106 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 CTAG2O75638 210 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 IFNW1P05000 195 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 GPX1P07203 203 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 TACSTD2P09758 323 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 GZMBP10144 247 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 ZNF22P17026 224 aaPredicted RBP0.33□□□□□ -2.36
CCDC93-209ENST00000488908 MSR1P21757 451 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 BLVRBP30043 206 aaPredicted RBP0.33□□□□□ -2.36
CCDC93-209ENST00000488908 SLC35A1P78382 337 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 RPL18AQ02543 176 aaKnown RBP0.33□□□□□ -2.36
CCDC93-209ENST00000488908 BEX5Q5H9J7 111 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 CARD17Q5XLA6 110 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 SLC25A25Q6KCM7 469 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 NOXRED1Q6NXP6 359 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 ZCCHC24Q8N2G6 241 aaKnown RBP0.33□□□□□ -2.36
CCDC93-209ENST00000488908 MUC15Q8N387 334 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 TCAIMQ8N3R3 496 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 OR56A4Q8NGH8 313 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 ZNF563Q8TA94 476 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 FAM81AQ8TBF8 368 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 LMX1AQ8TE12 382 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 C2orf15Q8WU43 125 aaKnown RBP0.33□□□□□ -2.36
CCDC93-209ENST00000488908 ING5Q8WYH8 240 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 MCUR1Q96AQ8 359 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 ZNF625Q96I27 306 aaPredicted RBP0.33□□□□□ -2.36
CCDC93-209ENST00000488908 HSPB9Q9BQS6 159 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 SRRQ9GZT4 340 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 PORCNQ9H237 461 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 MFSD1Q9H3U5 465 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 ANKRA2Q9H9E1 313 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 CCNB1IP1Q9NPC3 277 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 TMEM100Q9NV29 134 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 PTTG3PQ9NZH4 202 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 PRO0628Q9UI54 55 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 PSORS1C2Q9UIG4 136 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 VAX2Q9UIW0 290 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 OR51B2Q9Y5P1 312 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 HSPE1-MOB4S4R3N1 261 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 U3KQK5 164 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 ADAMTS7Q9UKP4 1686 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 MROH7Q68CQ1 1323 aa0.33□□□□□ -2.36
CCDC93-209ENST00000488908 MDC1Q14676 2089 aaKnown RBP0.33□□□□□ -2.36
CCDC93-209ENST00000488908 MALRD1Q5VYJ5 2156 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 TRBV24-1A0A075B6N3 115 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 IGKV1D-37A0A075B6S9 117 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 A0A0B4J2E0 115 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 A0A1W2PRD5 423 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 GOLGA8OA6NCC3 632 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 F8VP50 259 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 GOLGA8NF8WBI6 632 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 UPK1AO00322 258 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 ISLRO14498 428 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 MPDU1O75352 247 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 POP7O75817 140 aaKnown RBP0.32□□□□□ -2.36
CCDC93-209ENST00000488908 AGTP01019 485 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 ERCC1P07992 297 aaPredicted RBP0.32□□□□□ -2.36
CCDC93-209ENST00000488908 KRT16P08779 473 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 PRB4P10163 310 aaPredicted RBP0.32□□□□□ -2.36
CCDC93-209ENST00000488908 GTF2F2P13984 249 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms