RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 NME1P15531 152 aaKnown RBP12.52□□□□□ -0.41
NR1H3-220ENST00000481020 HIST1H1BP16401 226 aaKnown RBP12.52□□□□□ -0.41
NR1H3-220ENST00000481020 ITGA3P26006 1051 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 OTX1P32242 354 aaPredicted RBP12.52□□□□□ -0.41
NR1H3-220ENST00000481020 RPS10P46783 165 aaKnown RBP12.52□□□□□ -0.41
NR1H3-220ENST00000481020 RGS19P49795 217 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 HIST1H3AP68431 136 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 BAXQ07812 192 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 SP5Q6BEB4 398 aaPredicted RBP12.52□□□□□ -0.41
NR1H3-220ENST00000481020 LCN10Q6JVE6 187 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 SLC22A25Q6T423 547 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 ASCL4Q6XD76 172 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 RNF144BQ7Z419 303 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 KMT5CQ86Y97 462 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 OR4D5Q8NGN0 318 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 MR1Q95460 341 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 MSI2Q96DH6 328 aaKnown RBP12.52□□□□□ -0.41
NR1H3-220ENST00000481020 BOD1Q96IK1 185 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 GAS2L1Q99501 681 aaPredicted RBP12.52□□□□□ -0.41
NR1H3-220ENST00000481020 RSRP1Q9BUV0 290 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 EMC6Q9BV81 110 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 FAM86C1Q9NVL1 165 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 SEMA5BQ9P283 1151 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 MCTS1Q9ULC4 181 aaKnown RBP12.52□□□□□ -0.41
NR1H3-220ENST00000481020 VDAC3Q9Y277 283 aa12.52□□□□□ -0.41
NR1H3-220ENST00000481020 ZNF726A6NNF4 738 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 ZNF732B4DXR9 585 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 H3BQ15 152 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 OR5AC1P0C628 307 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 FCGR2AP12318 317 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 SERPINA2P20848 420 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 ARL4DP49703 201 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 GFERP55789 205 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 PNRC1Q12796 327 aaPredicted RBP12.51□□□□□ -0.41
NR1H3-220ENST00000481020 ZNF506Q5JVG8 444 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 C10orf128Q5T292 105 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 FBXL14Q8N1E6 418 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 OR2C3Q8N628 320 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 FAM213BQ8TBF2 198 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 MOB3AQ96BX8 217 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 TVP23CQ96ET8 276 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 C20orf24Q9BUV8 137 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 C11orf1Q9H5F2 150 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 PLEKHF2Q9H8W4 249 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 CERS4Q9HA82 394 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 ZNF160Q9HCG1 818 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 TRAV1-1A0A0B4J248 108 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 ZNF587BE7ETH6 402 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 PPP1R2P9O14990 202 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 RER1O15258 196 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 TMEM225BP0DP42 221 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 DAOP14920 347 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 MSR1P21757 451 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 UBE2KP61086 200 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 EWSR1Q01844 656 aaKnown RBP eCLIP12.51□□□□□ -0.41
NR1H3-220ENST00000481020 PLPPR5Q32ZL2 321 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 KHDC3LQ587J8 217 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 PYY3Q5JQD4 70 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 OGFOD3Q6PK18 319 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 ZNF574Q6ZN55 896 aaPredicted RBP12.51□□□□□ -0.41
NR1H3-220ENST00000481020 C1QL2Q7Z5L3 287 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 D2HGDHQ8N465 521 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 OR5L2Q8NGL0 311 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 M1APQ8TC57 530 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 CPNE4Q96A23 557 aaPredicted RBP12.51□□□□□ -0.41
NR1H3-220ENST00000481020 FBXO17Q96EF6 278 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 NIPSNAP3BQ9BS92 247 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 NELFAQ9H3P2 528 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 SLC2A9Q9NRM0 540 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 IL36GQ9NZH8 169 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 DOK5Q9P104 306 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 ZNF391Q9UJN7 358 aa12.51□□□□□ -0.41
NR1H3-220ENST00000481020 PUS1Q9Y606 427 aaKnown RBP eCLIP12.51□□□□□ -0.41
NR1H3-220ENST00000481020 DOCK8Q8NF50 2099 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 CCDC85CA6NKD9 419 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 ZNF850A8MQ14 1090 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 HSD17B6O14756 317 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 SRP19P09132 144 aaKnown RBP12.5□□□□□ -0.41
NR1H3-220ENST00000481020 QDPRP09417 244 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 OR13C7P0DN81 318 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 TAGLN2P37802 199 aaKnown RBP12.5□□□□□ -0.41
NR1H3-220ENST00000481020 GLIPR1P48060 266 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 PPM1FP49593 454 aaPredicted RBP12.5□□□□□ -0.41
NR1H3-220ENST00000481020 TLE4Q04727 773 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 SMAD4Q13485 552 aaKnown RBP12.5□□□□□ -0.41
NR1H3-220ENST00000481020 ELOBQ15370 118 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 CNN3Q15417 329 aaKnown RBP12.5□□□□□ -0.41
NR1H3-220ENST00000481020 OR8G1Q15617 311 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 UBE2V2Q15819 145 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 SRSF7Q16629 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
NR1H3-220ENST00000481020 NCMAPQ5T1S8 102 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 C6orf201Q7Z4U5 140 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.5□□□□□ -0.41
NR1H3-220ENST00000481020 LYZL4Q96KX0 146 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 NKX2-4Q9H2Z4 354 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 ZNF286AQ9HBT8 521 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 B3GALT1Q9Y5Z6 326 aa12.5□□□□□ -0.41
NR1H3-220ENST00000481020 CACNA1CQ13936 2221 aa12.49□□□□□ -0.41
NR1H3-220ENST00000481020 IGKV1D-8A0A087WSZ0 117 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms