RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PSME3P61289 254 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 RIPPLY1Q0D2K3 151 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 CASC10Q5T4H9 136 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 ZNF684Q5T5D7 378 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 CGB2Q6NT52 195 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 KCTD18Q6PI47 426 aaPredicted RBP12.82□□□□□ -0.36
DDX56-210ENST00000479440 C10orf99Q6UWK7 81 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 ZNF676Q8N7Q3 588 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 Q8NFD4 153 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 OTOSQ8NHW6 89 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 MUC7Q8TAX7 377 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 THEM6Q8WUY1 208 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 TFAP2CQ92754 450 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 OTULINQ96BN8 352 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 NRIP2Q9BQI9 281 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 CLEC7AQ9BXN2 247 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 CMC2Q9NRP2 79 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 ARMC1Q9NVT9 282 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 ENPP5Q9UJA9 477 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 SLC22A13Q9Y226 551 aa12.82□□□□□ -0.36
DDX56-210ENST00000479440 NUDT19A8MXV4 375 aa12.81□□□□□ -0.36
DDX56-210ENST00000479440 M0QZK8 103 aa12.81□□□□□ -0.36
DDX56-210ENST00000479440 SOX14O95416 240 aa12.81□□□□□ -0.36
DDX56-210ENST00000479440 MYCNOSP40205 109 aa12.81□□□□□ -0.36
DDX56-210ENST00000479440 GP2P55259 537 aaKnown RBP12.81□□□□□ -0.36
DDX56-210ENST00000479440 RPL23AP62750 156 aaKnown RBP12.81□□□□□ -0.36
DDX56-210ENST00000479440 MEF2CQ06413 473 aaPredicted RBP12.81□□□□□ -0.36
DDX56-210ENST00000479440 DMRTC1Q5HYR2 192 aa12.81□□□□□ -0.36
DDX56-210ENST00000479440 NKAPLQ5M9Q1 402 aa12.81□□□□□ -0.36
DDX56-210ENST00000479440 STMN2Q93045 179 aa12.81□□□□□ -0.36
DDX56-210ENST00000479440 RBM14Q96PK6 669 aaKnown RBP12.81□□□□□ -0.36
DDX56-210ENST00000479440 TMEM133Q9H2Q1 129 aa12.81□□□□□ -0.36
DDX56-210ENST00000479440 HES4Q9HCC6 221 aa12.81□□□□□ -0.36
DDX56-210ENST00000479440 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.81□□□□□ -0.36
DDX56-210ENST00000479440 LYVE1Q9Y5Y7 322 aa12.81□□□□□ -0.36
DDX56-210ENST00000479440 hADV38S2A0JD32 116 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 MEX3AA1L020 520 aaKnown RBP12.8□□□□□ -0.36
DDX56-210ENST00000479440 FAM183AA6NL82 134 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 TNFRSF11BO00300 401 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 GSC2O15499 205 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 CCNB2O95067 398 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 H2AFXP16104 143 aaPredicted RBP12.8□□□□□ -0.36
DDX56-210ENST00000479440 C9orf152Q5JTZ5 239 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 PLBD1Q6P4A8 553 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 TRPM8Q7Z2W7 1104 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 OR8H2Q8N162 312 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 AQP11Q8NBQ7 271 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 MED20Q9H944 212 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 PIGLQ9Y2B2 252 aa12.8□□□□□ -0.36
DDX56-210ENST00000479440 ACOD1A6NK06 481 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 CCDC22O60826 627 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 NRASP01111 189 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 GASTP01350 101 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 CBX1P83916 185 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 SNAPC1Q16533 368 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 C8orf86Q6ZUL3 223 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 TCF23Q7RTU1 214 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 OR2W3Q7Z3T1 314 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 KRT77Q7Z794 578 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 BATF2Q8N1L9 274 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 OR4P4Q8NGL7 312 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 BCAS4Q8TDM0 211 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 NSMCE2Q96MF7 247 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 OR51V1Q9H2C8 321 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 VNN3Q9NY84 501 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 LSM4Q9Y4Z0 139 aaKnown RBP12.79□□□□□ -0.36
DDX56-210ENST00000479440 LINC00312Q9Y6C7 94 aa12.79□□□□□ -0.36
DDX56-210ENST00000479440 SELENOFO60613 162 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 DHRS3O75911 302 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 CD24P25063 80 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 MPZP25189 248 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 HMGA2P52926 109 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 EDDM3AQ14507 147 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 RNF148Q8N7C7 305 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 KLHL30-AS1Q8NEE0 82 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 TEX47Q8TBZ9 253 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 ZNF596Q8TC21 504 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 P2RX4Q99571 388 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 PAPOLBQ9NRJ5 636 aaKnown RBP12.78□□□□□ -0.36
DDX56-210ENST00000479440 ZFP57Q9NU63 452 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 FAM206AQ9NX38 181 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 DPM3Q9P2X0 92 aa12.78□□□□□ -0.36
DDX56-210ENST00000479440 TMEM269A0A1B0GVZ9 245 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 SH2D7A6NKC9 451 aaPredicted RBP12.77□□□□□ -0.37
DDX56-210ENST00000479440 PSMD9O00233 223 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 ZNF737O75373 536 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 CLVS2Q5SYC1 327 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 OR51E1Q8TCB6 317 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 CHPT1Q8WUD6 406 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 SNX22Q96L94 193 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 ASCL2Q99929 193 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 PALMDQ9NP74 551 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 GPR84Q9NQS5 396 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 LAMP5Q9UJQ1 280 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 MOB4Q9Y3A3 225 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 HSPE1-MOB4S4R3N1 261 aa12.77□□□□□ -0.37
DDX56-210ENST00000479440 PQLC2LA1A4F0 135 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 DLGAP1O14490 977 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 ARPC2O15144 300 aa12.76□□□□□ -0.37
DDX56-210ENST00000479440 IGLV3-1P01715 115 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms