RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 TYROBPO43914 113 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 ELLP55199 621 aaPredicted RBP4.9□□□□□ -1.63
USF3-202ENST00000478658 NHSL2Q5HYW2 709 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 CPZQ66K79 652 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 OR2T2Q6IF00 324 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 ABHD15Q6UXT9 468 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 SLC39A5Q6ZMH5 540 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 BIRC7Q96CA5 298 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 GPR82Q96P67 336 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 DMRTA2Q96SC8 542 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 SOSTQ9BQB4 213 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 NARFLQ9H6Q4 476 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 Q9N2K0 584 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 IL23AQ9NPF7 189 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 ERCC6L2Q5T890 1561 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 SNRPGP15A8MWD9 76 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 H3BMH7 237 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 FGF18O76093 207 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 CD3EP07766 207 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 CFHP08603 1231 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 ERVFRD-1P60508 538 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 SUMO2P61956 95 aaKnown RBP4.89□□□□□ -1.63
USF3-202ENST00000478658 THAP3Q8WTV1 239 aaPredicted RBP4.89□□□□□ -1.63
USF3-202ENST00000478658 OPALINQ96PE5 141 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 INPP5KQ9BT40 448 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 C19orf24Q9BVV8 132 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 MRPL20Q9BYC9 149 aaKnown RBP4.89□□□□□ -1.63
USF3-202ENST00000478658 SMIM3Q9BZL3 60 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 KLK11Q9UBX7 282 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 CACNA1DQ01668 2161 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 C1QTNF9BB2RNN3 333 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 TBXA2RP21731 343 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 SCAND1P57086 179 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 IFITM2Q01629 132 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 EMX1Q04741 257 aaPredicted RBP4.89□□□□□ -1.63
USF3-202ENST00000478658 DHRS2Q13268 280 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 TMEM241Q24JQ0 296 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 ZNF562Q6V9R5 426 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 ZNF841Q6ZN19 808 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 SLC25A26Q70HW3 274 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 LHFPL5Q8TAF8 219 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 ADAMTS17Q8TE56 1095 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 CLEC4DQ8WXI8 215 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 FUBP1Q96AE4 644 aaKnown RBP4.89□□□□□ -1.63
USF3-202ENST00000478658 OR2A5Q96R48 311 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 CITED2Q99967 270 aaPredicted RBP4.89□□□□□ -1.63
USF3-202ENST00000478658 SLC46A2Q9BY10 475 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 ST6GALNAC4Q9H4F1 302 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 PI4KAP42356 2102 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 TCRBV16S1A1N1A0A5B0 115 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 TFAP2AP05549 437 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 GRPP07492 148 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 PSG2P11465 335 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 ZNF385BQ569K4 471 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 EPGNQ6UW88 154 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 WDTC1Q8N5D0 677 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 OR10G8Q8NGN5 311 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 LYRM4Q9HD34 91 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 PEMTQ9UBM1 199 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 KCNE5Q9UJ90 142 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 CXorf1O96002 111 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 ZNF735P0CB33 412 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 PRF1P14222 555 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 OPRM1P35372 400 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 LEPP41159 167 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 LILRA4P59901 499 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 SELENOTP62341 195 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 SAPCD1Q5SSQ6 148 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 CLDN23Q96B33 292 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 NIPSNAP1Q9BPW8 284 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 NPFFR1Q9GZQ6 430 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 IL21Q9HBE4 155 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 NIT2Q9NQR4 276 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 WSB2Q9NYS7 404 aaPredicted RBP4.89□□□□□ -1.63
USF3-202ENST00000478658 TBX21Q9UL17 535 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 VSIG4Q9Y279 399 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 KLF12Q9Y4X4 402 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 A0A1B0GX78 115 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 HS3ST1O14792 307 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 APOMO95445 188 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 CEACAM5P06731 702 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 LINC00869P0C866 280 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 IGFBP2P18065 325 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 COL8A1P27658 744 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 MGAT2Q10469 447 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 KIRREL2Q6UWL6 708 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 C20orf196Q8IYI0 205 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 DNAJC5GQ8N7S2 189 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 SLC25A46Q96AG3 418 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 SIT1Q9Y3P8 196 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 SEC16AO15027 2179 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 LOC107984156A0A0G2JMH3 177 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 A0A1W2PRU2 124 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 SNURFLB1AK76 121 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 SPINT1O43278 529 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 NDUFA2O43678 99 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 NDUFC2O95298 119 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 BMP2P12643 396 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 MAGEA5P43359 124 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 NKX1-1Q15270 411 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms