RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 RBM22Q9NW64 420 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB1P26-201ENST00000452520 USE1Q9NZ43 259 aa3.35□□□□□ -1.87
HMGB1P26-201ENST00000452520 PSG11Q9UQ72 335 aa3.35□□□□□ -1.87
HMGB1P26-201ENST00000452520 IGKV6D-21A0A0A0MT36 114 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 CCL15-CCL14A0A0B4J2E2 113 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 A0A1W2PRG6 482 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 PANO1I0J062 215 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 RLN2P04090 185 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 HOXA9P31269 272 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 KIR3DL2P43630 455 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 ERFP50548 548 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 CCR6P51684 374 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 DLX6P56179 175 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 CLDN12P56749 244 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 RAP1AP62834 184 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 CCL15Q16663 113 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 COQ5Q5HYK3 327 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 AP1ARQ63HQ0 302 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 ZNF530Q6P9A1 599 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 Q6ZSR6 202 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 ENTHD1Q8IYW4 607 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 LINC00337Q8N6G1 96 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 C22orf15Q8WYQ4 148 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 ELSPBP1Q96BH3 223 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 PPWD1Q96BP3 646 aaKnown RBP3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 OR52D1Q9H346 318 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 MFSD1Q9H3U5 465 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 RPP21Q9H633 154 aaKnown RBP3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 ENPP4Q9Y6X5 453 aa3.34□□□□□ -1.87
HMGB1P26-201ENST00000452520 IGLV1-50A0A075B6I6 118 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 IGHV1OR15-9A0A0B4J2B8 117 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 IGHV5-10-1A0A0J9YXX1 117 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 A0A1B0GVX0 72 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 WI2-2373I1.2A0A1W2PRP0 233 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 C11orf94C9JXX5 98 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 SYNGR1O43759 233 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 HPGDSO60760 199 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 CCDC22O60826 627 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 SPAG7O75391 227 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 GCM2O75603 506 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 MT-ND4P03905 459 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 PCCAP05165 728 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 TLX1NBP0CAT3 122 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 IGHV1-8P0DP01 117 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 COX5BP10606 129 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 AZU1P20160 251 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 GRPRP30550 384 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 ACOT2P49753 483 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 PRDX1Q06830 199 aaKnown RBP3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 CKAP4Q07065 602 aaKnown RBP3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 ADIGQ0VDE8 80 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 SLC36A2Q495M3 483 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 MPV17L2Q567V2 206 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 CASP12Q6UXS9 341 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 MDP1Q86V88 176 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 WDFY1Q8IWB7 410 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 CPNE4Q96A23 557 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 S100PBPQ96BU1 408 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 CEP170P1Q96L14 293 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 C18orf15Q96N68 181 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 OR2A5Q96R48 311 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 GGTLC1Q9BX51 225 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 TAPBPLQ9BX59 468 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 C12orf10Q9HB07 376 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 WFDC1Q9HC57 220 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 PRO0628Q9UI54 55 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 MTCH2Q9Y6C9 303 aa3.33□□□□□ -1.88
HMGB1P26-201ENST00000452520 A0A1B0GXF2 115 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 NKX2-6A6NCS4 301 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 ZNF861PO60384 105 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 ENTPD6O75354 484 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 OCM2P0CE71 109 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 HIST1H1CP16403 213 aaKnown RBP3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 TAC1P20366 129 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 M6PRP20645 277 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 PRSS3P35030 304 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 LGALS7P47929 136 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 SLC18A1P54219 525 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 RPL10AP62906 217 aaKnown RBP3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 GRB2P62993 217 aaKnown RBP3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 C16orf72Q14CZ0 275 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 RGS21Q2M5E4 152 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 SMUG1Q53HV7 270 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 CALHM1Q8IU99 346 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 PCP2Q8IVA1 136 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 C12orf56Q8IXR9 622 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 COQ8AQ8NI60 647 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 CCL17Q92583 94 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 SNF8Q96H20 258 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 FMC1Q96HJ9 113 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 SMIM8Q96KF7 97 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 OR10C1Q96KK4 312 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 FAM210BQ96KR6 192 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 MBOAT7Q96N66 472 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 SPACA5Q96QH8 159 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 PITX2Q99697 317 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 ZNF649Q9BS31 505 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 FAAP24Q9BTP7 215 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 SLC17A9Q9BYT1 436 aa3.32□□□□□ -1.88
HMGB1P26-201ENST00000452520 FGF23Q9GZV9 251 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms