RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ST8SIA4Q92187 359 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 CALHM2Q9HA72 323 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 PTPN13Q12923 2485 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 IGKV1-27A0A075B6S5 117 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 OR6C65A6NJZ3 312 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 RGS11O94810 467 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 AGFG2O95081 481 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 MPC2O95563 127 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 PMP2P02689 132 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 CXCL2P19875 107 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 PRKACBP22694 351 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 ZBTB25P24278 435 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 CBX5P45973 191 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 MTCP1P56278 107 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 PRSS12P56730 875 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 ARPC4P59998 168 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 FAM3AP98173 230 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 OR8B8Q15620 311 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 ACTBL2Q562R1 376 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 VAX1Q5SQQ9 334 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 RTL6Q6ICC9 239 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 ASB13Q8WXK3 278 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 FBXW5Q969U6 566 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 SPSB4Q96A44 273 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 C1QTNF5Q9BXJ0 243 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 PECRQ9BY49 303 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 PRDM14Q9GZV8 571 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 FN3KRPQ9HA64 309 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 PRELID1Q9Y255 219 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 MEMO1Q9Y316 297 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 RTTNQ86VV8 2226 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 ZNF587BE7ETH6 402 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 IL2RAP01589 272 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 CPT2P23786 658 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 BLVRBP30043 206 aaPredicted RBP9.25□□□□□ -0.93
PKP4-206ENST00000452162 FOXG1P55316 489 aaPredicted RBP9.25□□□□□ -0.93
PKP4-206ENST00000452162 ZNF92Q03936 586 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 CNN3Q15417 329 aaKnown RBP9.25□□□□□ -0.93
PKP4-206ENST00000452162 LY6G6FQ5SQ64 297 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 CLVS2Q5SYC1 327 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 COLCA1Q6ZS62 124 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 ZNF680Q8NEM1 530 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 CCDC120Q96HB5 630 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 Q96M66 194 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 S100A13Q99584 98 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 FAM215AQ9Y5M1 114 aa9.25□□□□□ -0.93
PKP4-206ENST00000452162 ANKRD34BA5PLL1 514 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 FIGNL2A6NMB9 653 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 XRCC2O43543 280 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 CA11O75493 328 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 SLC22A5O76082 557 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 IFNA6P05013 189 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 IKZF1Q13422 519 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 ARFRP1Q13795 201 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 GK2Q14410 553 aaPredicted RBP9.24□□□□□ -0.93
PKP4-206ENST00000452162 RNPS1Q15287 305 aaKnown RBP9.24□□□□□ -0.93
PKP4-206ENST00000452162 ASCL4Q6XD76 172 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 LYG2Q86SG7 212 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 HOGA1Q86XE5 327 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 ELMOD3Q96FG2 381 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 CPNE2Q96FN4 548 aaPredicted RBP9.24□□□□□ -0.93
PKP4-206ENST00000452162 DMRTA2Q96SC8 542 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 VKORC1Q9BQB6 163 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 PRRG4Q9BZD6 226 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 LOC100509620A0A075B734 347 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 FAM230AA0A1W2PPH8 454 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 SERPINE3A8MV23 424 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 MCRIP1C9JLW8 97 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 ZG16O60844 167 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 WDR1O75083 606 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 NRASP01111 189 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 TMEM225BP0DP42 221 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 FOSL1P15407 271 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 ADORA2A-AS1P86434 159 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 SRSF4Q08170 494 aaKnown RBP9.24□□□□□ -0.93
PKP4-206ENST00000452162 PPP1R1AQ13522 171 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 GRK1Q15835 563 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 C9orf135Q5VTT2 229 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 FAHD2BQ6P2I3 314 aaPredicted RBP9.24□□□□□ -0.93
PKP4-206ENST00000452162 LHFPL2Q6ZUX7 228 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 ARRDC1Q8N5I2 433 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 APH1AQ96BI3 265 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 FAHD2AQ96GK7 314 aa9.24□□□□□ -0.93
PKP4-206ENST00000452162 DPCDQ9BVM2 203 aaPredicted RBP9.24□□□□□ -0.93
PKP4-206ENST00000452162 ELL3Q9HB65 397 aaPredicted RBP9.24□□□□□ -0.93
PKP4-206ENST00000452162 ZMAT5Q9UDW3 170 aaKnown RBP9.24□□□□□ -0.93
PKP4-206ENST00000452162 A0A096LPE4 126 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 A0A1W2PPZ6 126 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 ZNF503-AS2A6NEH8 195 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 CEACAM18A8MTB9 384 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 HMSDA8MTL9 139 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 SNAPC5O75971 98 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 HLA-AP01891 365 aaKnown RBP9.23□□□□□ -0.93
PKP4-206ENST00000452162 COX5BP10606 129 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 NFYAP23511 347 aaPredicted RBP9.23□□□□□ -0.93
PKP4-206ENST00000452162 CD34P28906 385 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 RBP2P50120 134 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 SEC61A1P61619 476 aaKnown RBP9.23□□□□□ -0.93
PKP4-206ENST00000452162 OPCMLQ14982 345 aa9.23□□□□□ -0.93
PKP4-206ENST00000452162 ARL6IP1Q15041 203 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms