RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 TK1P04183 234 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 FAHP16930 419 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 MPZP25189 248 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 ATP6V1E1P36543 226 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 FUT6P51993 359 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 HCCSP53701 268 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 CXCR4P61073 352 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 MEF2CQ06413 473 aaPredicted RBP5.77□□□□□ -1.49
VPS41-208ENST00000448833 SRSF4Q08170 494 aaKnown RBP5.77□□□□□ -1.49
VPS41-208ENST00000448833 HERPUD1Q15011 391 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 SLX4IPQ5VYV7 408 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 TMEM42Q69YG0 159 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 TMEM200BQ69YZ2 307 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 PLEKHG7Q6ZR37 379 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 Q6ZSR3 168 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 GDPD3Q7L5L3 318 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 KCTD20Q7Z5Y7 419 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 SLC35F2Q8IXU6 374 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 FGFRL1Q8N441 504 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 BBS1Q8NFJ9 593 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 PPP1R35Q8TAP8 253 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 TMEM163Q8TC26 289 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 BCAS4Q8TDM0 211 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 TAF15Q92804 592 aaKnown RBP eCLIP5.77□□□□□ -1.49
VPS41-208ENST00000448833 NRIP2Q9BQI9 281 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 SEBOXQ9HB31 216 aaPredicted RBP5.77□□□□□ -1.49
VPS41-208ENST00000448833 NEK6Q9HC98 313 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 ABCB10Q9NRK6 738 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 WARS2Q9UGM6 360 aaKnown RBP5.77□□□□□ -1.49
VPS41-208ENST00000448833 ZNF222Q9UK12 451 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 OR52A1Q9UKL2 312 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 KLHDC2Q9Y2U9 406 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 TBL2Q9Y4P3 447 aaKnown RBP5.77□□□□□ -1.49
VPS41-208ENST00000448833 V9GYS6 101 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 PQLC2LA1A4F0 135 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 FUOMA2VDF0 154 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 SNTNA6NMZ2 147 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 VGLL3A8MV65 326 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 K7N7A8 449 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 PSMD9O00233 223 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 PLXNB1O43157 2135 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 SYT7O43581 403 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 PEX14O75381 377 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 ALDOBP05062 364 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 MRPL3P09001 348 aaKnown RBP5.76□□□□□ -1.49
VPS41-208ENST00000448833 UBCP0CG48 685 aaKnown RBP5.76□□□□□ -1.49
VPS41-208ENST00000448833 SELLP14151 372 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 CCL1P22362 96 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 FASP25445 335 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 DAPP51397 102 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 ARHGDIBP52566 201 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 OR12D2P58182 307 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 ELF3P78545 371 aaPredicted RBP5.76□□□□□ -1.49
VPS41-208ENST00000448833 EFNB1P98172 346 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 KLRD1Q13241 179 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 AADACL4Q5VUY2 407 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 ASRGL1Q7L266 308 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 REC114Q7Z4M0 266 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 MKXQ8IYA7 352 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 HS3ST5Q8IZT8 346 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 CD177Q8N6Q3 437 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 TCEANCQ8N8B7 351 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 YIPF7Q8N8F6 280 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 OR4S1Q8NGB4 309 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 RPS4Y2Q8TD47 263 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 TRUB1Q8WWH5 349 aaKnown RBP5.76□□□□□ -1.49
VPS41-208ENST00000448833 PP6455Q8WZ26 134 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 UTP4Q969X6 686 aaKnown RBP5.76□□□□□ -1.49
VPS41-208ENST00000448833 PPP1R14AQ96A00 147 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 MRPL48Q96GC5 212 aaKnown RBP5.76□□□□□ -1.49
VPS41-208ENST00000448833 AJUBAQ96IF1 538 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 APOL4Q9BPW4 351 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 SEMA6AQ9H2E6 1030 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 RHOFQ9HBH0 211 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 ADGRL4Q9HBW9 690 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 HES4Q9HCC6 221 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 C19orf12Q9NSK7 152 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.76□□□□□ -1.49
VPS41-208ENST00000448833 SLC22A13Q9Y226 551 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 PCDHGB5Q9Y5G0 923 aa5.76□□□□□ -1.49
VPS41-208ENST00000448833 FAM230AA0A1W2PPH8 454 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 hADV38S2A0JD32 116 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 CCDC182A6NF36 153 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 METTL15A6NJ78 407 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 FAM90A8PA6NJQ4 464 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 ZAR1LA6NP61 321 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 C17orf98A8MV24 154 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 DYNC1I1O14576 645 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 XPNPEP2O43895 674 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 PRKYO43930 277 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 SRSF10O75494 262 aaKnown RBP5.75□□□□□ -1.49
VPS41-208ENST00000448833 OPN1MWP04001 364 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 OCM2P0CE71 109 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 OCMP0CE72 109 aaPredicted RBP5.75□□□□□ -1.49
VPS41-208ENST00000448833 ZNF728P0DKX0 622 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 OPN1MW2P0DN77 364 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 OPN1MW3P0DN78 364 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 PRKACBP22694 351 aa5.75□□□□□ -1.49
VPS41-208ENST00000448833 AZGP1P25311 298 aaKnown RBP5.75□□□□□ -1.49
VPS41-208ENST00000448833 PEX2P28328 305 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms