RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 KDM4DQ6B0I6 523 aa17.12■□□□□ 0.33
VSX1-206ENST00000444511 ANGPTL5Q86XS5 388 aa17.12■□□□□ 0.33
VSX1-206ENST00000444511 YIPF7Q8N8F6 280 aa17.12■□□□□ 0.33
VSX1-206ENST00000444511 OR4C13Q8NGP0 309 aa17.12■□□□□ 0.33
VSX1-206ENST00000444511 TRMT10AQ8TBZ6 339 aaKnown RBP17.12■□□□□ 0.33
VSX1-206ENST00000444511 AJUBAQ96IF1 538 aa17.12■□□□□ 0.33
VSX1-206ENST00000444511 TBX5Q99593 518 aa17.12■□□□□ 0.33
VSX1-206ENST00000444511 MEGF9Q9H1U4 602 aa17.12■□□□□ 0.33
VSX1-206ENST00000444511 SLC22A13Q9Y226 551 aa17.12■□□□□ 0.33
VSX1-206ENST00000444511 DYNC1I1O14576 645 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 TK1P04183 234 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 CCL3L1P16619 93 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 MPZP25189 248 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 FASP25445 335 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 LGALS4P56470 323 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 ERVFRD-1P60508 538 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 AANATQ16613 207 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 ODF4Q2M2E3 257 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 FAM110DQ8TAY7 271 aaPredicted RBP17.11■□□□□ 0.33
VSX1-206ENST00000444511 HES4Q9HCC6 221 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 RAB18Q9NP72 206 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 WARS2Q9UGM6 360 aaKnown RBP17.11■□□□□ 0.33
VSX1-206ENST00000444511 SLC7A11Q9UPY5 501 aa17.11■□□□□ 0.33
VSX1-206ENST00000444511 FAM230AA0A1W2PPH8 454 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 PIPP12273 146 aaPredicted RBP17.1■□□□□ 0.33
VSX1-206ENST00000444511 CCL1P22362 96 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 PAX6P26367 422 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 BMXP51813 675 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 IL24Q13007 206 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 ZNF273Q14593 569 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 Q6ZSR3 168 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 Q6ZTK2 550 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 SSX6Q7RTT6 188 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 CALHM1Q8IU99 346 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 C11orf42Q8N5U0 333 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 ASCC1Q8N9N2 400 aaKnown RBP17.1■□□□□ 0.33
VSX1-206ENST00000444511 PPP1R35Q8TAP8 253 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 PKIBQ9C010 78 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 GABARAPL1Q9H0R8 117 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 SIGLEC9Q9Y336 463 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 AP4S1Q9Y587 144 aa17.1■□□□□ 0.33
VSX1-206ENST00000444511 WNK1Q9H4A3 2382 aa17.09■□□□□ 0.33
VSX1-206ENST00000444511 VWFP04275 2813 aa17.09■□□□□ 0.33
VSX1-206ENST00000444511 H3BSH0 61 aa17.09■□□□□ 0.33
VSX1-206ENST00000444511 SYT7O43581 403 aa17.09■□□□□ 0.33
VSX1-206ENST00000444511 CSF1P09603 554 aa17.09■□□□□ 0.33
VSX1-206ENST00000444511 ERVK11-1P61568 191 aa17.09■□□□□ 0.33
VSX1-206ENST00000444511 ZNF782Q6ZMW2 699 aaPredicted RBP17.09■□□□□ 0.33
VSX1-206ENST00000444511 AMIGO2Q86SJ2 522 aa17.09■□□□□ 0.33
VSX1-206ENST00000444511 CIB1Q99828 191 aa17.09■□□□□ 0.33
VSX1-206ENST00000444511 ADI1Q9BV57 179 aa17.09■□□□□ 0.33
VSX1-206ENST00000444511 A0A1W2PQL4 384 aaPredicted RBP17.08■□□□□ 0.32
VSX1-206ENST00000444511 METTL15A6NJ78 407 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 APOL3O95236 402 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 OR2T7P0C7T2 308 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 HTR1FP30939 366 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 ATP6V1E1P36543 226 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 KIR2DS4P43632 304 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 COL10A1Q03692 680 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 BNIP1Q12981 228 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 HERPUD1Q15011 391 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 C11orf88Q6PI97 169 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 CATSPERDQ86XM0 798 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 OR10H4Q8NGA5 316 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 OR2T6Q8NHC8 308 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 CEP19Q96LK0 163 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 RANBP3Q9H6Z4 567 aaPredicted RBP17.08■□□□□ 0.32
VSX1-206ENST00000444511 CMYA5Q8N3K9 4069 aa17.08■□□□□ 0.32
VSX1-206ENST00000444511 K7N7A8 449 aa17.07■□□□□ 0.32
VSX1-206ENST00000444511 GATBO75879 557 aaKnown RBP17.07■□□□□ 0.32
VSX1-206ENST00000444511 CHRM2P08172 466 aa17.07■□□□□ 0.32
VSX1-206ENST00000444511 FCGR1AP12314 374 aa17.07■□□□□ 0.32
VSX1-206ENST00000444511 RASSF2P50749 326 aa17.07■□□□□ 0.32
VSX1-206ENST00000444511 EFNB2P52799 333 aa17.07■□□□□ 0.32
VSX1-206ENST00000444511 EDDM3BP56851 147 aa17.07■□□□□ 0.32
VSX1-206ENST00000444511 C1orf146Q5VVC0 180 aa17.07■□□□□ 0.32
VSX1-206ENST00000444511 LIAT1Q6ZQX7 453 aa17.07■□□□□ 0.32
VSX1-206ENST00000444511 NPFFR1Q9GZQ6 430 aa17.07■□□□□ 0.32
VSX1-206ENST00000444511 SULT1C4O75897 302 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 INMTO95050 263 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 SERPINA3P01011 423 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 FUT6P51993 359 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 UBE2V2Q15819 145 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 CRIP3Q6Q6R5 217 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 GDPD3Q7L5L3 318 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 LHFPL4Q7Z7J7 247 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 DTX3Q8N9I9 347 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 CCDC54Q8NEL0 328 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 OR13D1Q8NGV5 346 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 SLAMF9Q96A28 289 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 NKX3-1Q99801 234 aaPredicted RBP17.06■□□□□ 0.32
VSX1-206ENST00000444511 RIBC2Q9H4K1 309 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 MTCH1Q9NZJ7 389 aa17.06■□□□□ 0.32
VSX1-206ENST00000444511 C17orf98A8MV24 154 aa17.05■□□□□ 0.32
VSX1-206ENST00000444511 POLR2IP36954 125 aaKnown RBP17.05■□□□□ 0.32
VSX1-206ENST00000444511 DLX6P56179 175 aa17.05■□□□□ 0.32
VSX1-206ENST00000444511 PLA1AQ53H76 456 aa17.05■□□□□ 0.32
VSX1-206ENST00000444511 FAM220AQ7Z4H9 259 aa17.05■□□□□ 0.32
VSX1-206ENST00000444511 C1QL4Q86Z23 238 aa17.05■□□□□ 0.32
VSX1-206ENST00000444511 KLHDC1Q8N7A1 406 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms