RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 HES4Q9HCC6 221 aa16.83■□□□□ 0.28
CPNE1-219ENST00000440240 OR14J1Q9UGF5 321 aa16.83■□□□□ 0.28
CPNE1-219ENST00000440240 FOXJ3Q9UPW0 622 aa16.83■□□□□ 0.28
CPNE1-219ENST00000440240 SNX5Q9Y5X3 404 aa16.83■□□□□ 0.28
CPNE1-219ENST00000440240 A0A1B0GTI1 187 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 FAM90A8PA6NJQ4 464 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 VGLL3A8MV65 326 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 ZNF670-ZNF695F2Z2N8 137 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 CCL3L1P16619 93 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 COX7A1P24310 79 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 PAX6P26367 422 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 CEBPDP49716 269 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-219ENST00000440240 NXNL2Q5VZ03 156 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 Q6ZSR3 168 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 KLHDC1Q8N7A1 406 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 PIFOQ8TCI5 191 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 PKIBQ9C010 78 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 CLN6Q9NWW5 311 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 POMPQ9Y244 141 aa16.82■□□□□ 0.28
CPNE1-219ENST00000440240 C17orf98A8MV24 154 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 K7N7A8 449 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 BMXP51813 675 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 ERVK11-1P61568 191 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 EFNB1P98172 346 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 IL24Q13007 206 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 AADACL4Q5VUY2 407 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 BCDIN3DQ7Z5W3 292 aaKnown RBP16.81■□□□□ 0.28
CPNE1-219ENST00000440240 ANGPTL5Q86XS5 388 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 C11orf44Q8N8P7 122 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 OR13D1Q8NGV5 346 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 MALSU1Q96EH3 234 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 ADGRL4Q9HBW9 690 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 SLC7A11Q9UPY5 501 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 SLC22A13Q9Y226 551 aa16.81■□□□□ 0.28
CPNE1-219ENST00000440240 A6NIN4 97 aa16.8■□□□□ 0.28
CPNE1-219ENST00000440240 MAGEB4O15481 346 aaPredicted RBP16.8■□□□□ 0.28
CPNE1-219ENST00000440240 RBP4P02753 201 aa16.8■□□□□ 0.28
CPNE1-219ENST00000440240 CHRM2P08172 466 aa16.8■□□□□ 0.28
CPNE1-219ENST00000440240 ZNF273Q14593 569 aa16.8■□□□□ 0.28
CPNE1-219ENST00000440240 ZNF782Q6ZMW2 699 aaPredicted RBP16.8■□□□□ 0.28
CPNE1-219ENST00000440240 TCEANCQ8N8B7 351 aa16.8■□□□□ 0.28
CPNE1-219ENST00000440240 TMEM163Q8TC26 289 aa16.8■□□□□ 0.28
CPNE1-219ENST00000440240 MRM2Q9UI43 246 aaKnown RBP16.8■□□□□ 0.28
CPNE1-219ENST00000440240 TBL2Q9Y4P3 447 aaKnown RBP16.8■□□□□ 0.28
CPNE1-219ENST00000440240 NOTCH3Q9UM47 2321 aa16.8■□□□□ 0.28
CPNE1-219ENST00000440240 CHST1O43916 411 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 VSIG10L2P0DP72 767 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 PIPP12273 146 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-219ENST00000440240 CCL1P22362 96 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 DLX6P56179 175 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 COL10A1Q03692 680 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 SLX4IPQ5VYV7 408 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 LHFPL4Q7Z7J7 247 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 GID4Q8IVV7 300 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 ASCC1Q8N9N2 400 aaKnown RBP16.79■□□□□ 0.28
CPNE1-219ENST00000440240 UTP4Q969X6 686 aaKnown RBP16.79■□□□□ 0.28
CPNE1-219ENST00000440240 FOXRED1Q96CU9 486 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-219ENST00000440240 NKX3-1Q99801 234 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-219ENST00000440240 PLEKHA1Q9HB21 404 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 ABCB10Q9NRK6 738 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 KRT84Q9NSB2 600 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 PITPNC1Q9UKF7 332 aa16.79■□□□□ 0.28
CPNE1-219ENST00000440240 FAM230AA0A1W2PPH8 454 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 G3V4G9 280 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 DNAJC8O75937 253 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-219ENST00000440240 ARG1P05089 322 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 KRT8P05787 483 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 ZNF728P0DKX0 622 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 EMX1Q04741 257 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-219ENST00000440240 BEAN1Q3B7T3 259 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 PLEKHG7Q6ZR37 379 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 GDPD3Q7L5L3 318 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 BATF2Q8N1L9 274 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 YIPF7Q8N8F6 280 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 OR11H6Q8NGC7 330 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 RPS4Y2Q8TD47 263 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 ENOPH1Q9UHY7 261 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 TCF19Q9Y242 345 aa16.78■□□□□ 0.28
CPNE1-219ENST00000440240 ZAR1LA6NP61 321 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 G3V2T6 193 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 RPP14O95059 124 aaKnown RBP16.77■□□□□ 0.28
CPNE1-219ENST00000440240 SERPINA3P01011 423 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 RAB13P51153 203 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 FUT6P51993 359 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 EDDM3BP56851 147 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 FAM189A2Q15884 450 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 C12orf73Q69YU5 71 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 Q8N2B8 174 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 CCDC54Q8NEL0 328 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 TRMT10AQ8TBZ6 339 aaKnown RBP16.77■□□□□ 0.28
CPNE1-219ENST00000440240 CEP19Q96LK0 163 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 IL4I1Q96RQ9 567 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 ADI1Q9BV57 179 aa16.77■□□□□ 0.28
CPNE1-219ENST00000440240 MEGF11A6BM72 1044 aa16.76■□□□□ 0.27
CPNE1-219ENST00000440240 M0R129 80 aa16.76■□□□□ 0.27
CPNE1-219ENST00000440240 SYT7O43581 403 aa16.76■□□□□ 0.27
CPNE1-219ENST00000440240 ZNF737O75373 536 aa16.76■□□□□ 0.27
CPNE1-219ENST00000440240 GATBO75879 557 aaKnown RBP16.76■□□□□ 0.27
CPNE1-219ENST00000440240 OR2T7P0C7T2 308 aa16.76■□□□□ 0.27
CPNE1-219ENST00000440240 OR12D2P58182 307 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms