RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 GPR173Q9NS66 373 aa11.68□□□□□ -0.54
TNFRSF1A-203ENST00000437813 CLN6Q9NWW5 311 aa11.68□□□□□ -0.54
TNFRSF1A-203ENST00000437813 OR52A1Q9UKL2 312 aa11.68□□□□□ -0.54
TNFRSF1A-203ENST00000437813 IKZF2Q9UKS7 526 aa11.68□□□□□ -0.54
TNFRSF1A-203ENST00000437813 SLC22A13Q9Y226 551 aa11.68□□□□□ -0.54
TNFRSF1A-203ENST00000437813 IGKV1-27A0A075B6S5 117 aa11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 ODF3BA8MYP8 253 aa11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 K7N7A8 449 aa11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 GSC2O15499 205 aa11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 DNAJC8O75937 253 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 TK1P04183 234 aa11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 BMXP51813 675 aa11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 IL24Q13007 206 aa11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 COMMD2Q86X83 199 aa11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 TCEANCQ8N8B7 351 aa11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 PKIBQ9C010 78 aa11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 FAM234AQ9H0X4 552 aa11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 RANBP3Q9H6Z4 567 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-203ENST00000437813 A6NIN4 97 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 SLC1A7O00341 560 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 GABRA5P31644 462 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 ISL1P61371 349 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 C2orf68Q2NKX9 166 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 BCL2L15Q5TBC7 163 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 CCBE1Q6UXH8 406 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 LHFPL4Q7Z7J7 247 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 CATSPERDQ86XM0 798 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 ANGPTL5Q86XS5 388 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 Q8N2B8 174 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 OR4M1Q8NGD0 313 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 OR51G2Q8NGK0 314 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 OR2T27Q8NH04 317 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 IL4I1Q96RQ9 567 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 HEXA-AS1Q9H8Q6 139 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 SEBOXQ9HB31 216 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 USE1Q9NZ43 259 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 MTCH1Q9NZJ7 389 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 POLDIP2Q9Y2S7 368 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 SNX5Q9Y5X3 404 aa11.66□□□□□ -0.54
TNFRSF1A-203ENST00000437813 A0A0G2JK05 382 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 ANKRD61A6NGH8 418 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 NXPH2O95156 264 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 RBP4P02753 201 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 POLR2IP36954 125 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 HERPUD1Q15011 391 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 UBE2V2Q15819 145 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 LY6EQ16553 131 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 KPRPQ5T749 579 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 HIST2H2BDQ6DRA6 164 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 C11orf88Q6PI97 169 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 ASRGL1Q7L266 308 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 UBE2FQ969M7 185 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 KRT84Q9NSB2 600 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 SERTAD4Q9NUC0 356 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 FOXJ3Q9UPW0 622 aa11.65□□□□□ -0.54
TNFRSF1A-203ENST00000437813 A0A1W2PQL4 384 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 ZNF670-ZNF695F2Z2N8 137 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 G3V2T6 193 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 CAPZA1P52907 286 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 BNIP1Q12981 228 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 ZNF626Q68DY1 528 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 LIAT1Q6ZQX7 453 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 C1QL4Q86Z23 238 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 GID4Q8IVV7 300 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 BATF2Q8N1L9 274 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 PRSS35Q8N3Z0 413 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 OR11H6Q8NGC7 330 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 CIB1Q99828 191 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 PRRG3Q9BZD7 231 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 ZNF702PQ9H963 129 aa11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 WARS2Q9UGM6 360 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-203ENST00000437813 TMEM82A0PJX8 343 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 E9PQ18 207 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 OPN1MWP04001 364 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 CSF1P09603 554 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 ZNF728P0DKX0 622 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 OPN1MW2P0DN77 364 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 OPN1MW3P0DN78 364 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 HTR1FP30939 366 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 KIR3DL2P43630 455 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 ACTR3P61158 418 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 COL10A1Q03692 680 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 BEAN1Q3B7T3 259 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 SAMD5Q5TGI4 173 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 ZNF782Q6ZMW2 699 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 KLHDC1Q8N7A1 406 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 OR4C13Q8NGP0 309 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 FAM110DQ8TAY7 271 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 BCAS4Q8TDM0 211 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 CDCA4Q9BXL8 241 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 GABARAPL3Q9BY60 117 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 CHST5Q9GZS9 411 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 GTF2A1LQ9UNN4 478 aa11.63□□□□□ -0.55
TNFRSF1A-203ENST00000437813 IGKV1-9A0A0C4DH69 117 aa11.62□□□□□ -0.55
TNFRSF1A-203ENST00000437813 A0A1W2PPH5 198 aa11.62□□□□□ -0.55
TNFRSF1A-203ENST00000437813 A6NDX4 124 aa11.62□□□□□ -0.55
TNFRSF1A-203ENST00000437813 ADARB2-AS1A8MUL3 147 aa11.62□□□□□ -0.55
TNFRSF1A-203ENST00000437813 SULT1C4O75897 302 aa11.62□□□□□ -0.55
TNFRSF1A-203ENST00000437813 OR2T7P0C7T2 308 aa11.62□□□□□ -0.55
TNFRSF1A-203ENST00000437813 PIPP12273 146 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms