RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 BLVRBP30043 206 aaPredicted RBP18.13■□□□□ 0.49
PTPRF-207ENST00000436724 PPP1CBP62140 327 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 MRPL49Q13405 166 aaKnown RBP18.13■□□□□ 0.49
PTPRF-207ENST00000436724 IGFBP7Q16270 282 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 OR52W1Q6IF63 320 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 ALKBH2Q6NS38 261 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 ZDHHC23Q8IYP9 409 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 CSNK2A3Q8NEV1 391 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 TECTBQ96PL2 329 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 OPA3Q9H6K4 179 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 ATRXP46100 2492 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 OR5H1A6NKK0 313 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 FOXI3A8MTJ6 420 aaPredicted RBP18.12■□□□□ 0.49
PTPRF-207ENST00000436724 LEUTXA8MZ59 168 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 MPC2O95563 127 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 CYB5AP00167 134 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 IL5P05113 134 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 AKAIN1P0CW23 69 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 BMP5P22003 454 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 P2RX3P56373 397 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 SSBP1Q04837 148 aaKnown RBP18.12■□□□□ 0.49
PTPRF-207ENST00000436724 ZNF611Q8N823 705 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 STEAP2Q8NFT2 490 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 OR51S1Q8NGJ8 323 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 OR51F2Q8NH61 342 aa18.12■□□□□ 0.49
PTPRF-207ENST00000436724 DPCDQ9BVM2 203 aaPredicted RBP18.12■□□□□ 0.49
PTPRF-207ENST00000436724 TINAGL1Q9GZM7 467 aaPredicted RBP18.12■□□□□ 0.49
PTPRF-207ENST00000436724 PQLC2LA1A4F0 135 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 CECR9P0C854 216 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 ZNF81P51508 661 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 UCP2P55851 309 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 IKZF1Q13422 519 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 EIF2S3LQ2VIR3 472 aaKnown RBP18.11■□□□□ 0.49
PTPRF-207ENST00000436724 CEACAM21Q3KPI0 293 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 ASCL4Q6XD76 172 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 SLC25A26Q70HW3 274 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 FTMTQ8N4E7 242 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 SPICQ8N5J4 248 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 RADILQ96JH8 1075 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 Q96M66 194 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 TM2D1Q9BX74 207 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 CA10Q9NS85 328 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 MFNGO00587 321 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 CPT2P23786 658 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 FAUP35544 74 aaKnown RBP18.11■□□□□ 0.49
PTPRF-207ENST00000436724 HAAOP46952 286 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 ID4P47928 161 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 TAS2R19P59542 299 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 TAF9Q16594 264 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 ZNF626Q68DY1 528 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 C17orf78Q8N4C9 275 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 OR1J1Q8NGS3 322 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 SLC25A40Q8TBP6 338 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 SFXN3Q9BWM7 321 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 CHIAQ9BZP6 476 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 MGAT4CQ9UBM8 478 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 PCNX1Q96RV3 2341 aa18.11■□□□□ 0.49
PTPRF-207ENST00000436724 NBEAQ8NFP9 2946 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 ZNF732B4DXR9 585 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 CA6P23280 308 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 ALKBH6Q3KRA9 238 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 PIGYQ3MUY2 71 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 TMEM229BQ8NBD8 167 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 S100PBPQ96BU1 408 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 RELNP78509 3460 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 LINC00862A6NCI5 91 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 ANKRD30BLA7E2S9 258 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 ZNF736B4DX44 427 aaPredicted RBP18.1■□□□□ 0.49
PTPRF-207ENST00000436724 PYCARD-AS1I3L0S3 204 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 RAB3DO95716 219 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 HOXD4P09016 255 aaPredicted RBP18.1■□□□□ 0.49
PTPRF-207ENST00000436724 GSTP1P09211 210 aaKnown RBP18.1■□□□□ 0.49
PTPRF-207ENST00000436724 VSIG10L2P0DP72 767 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 NPBWR2P48146 333 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 FAM189A2Q15884 450 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 ESCO2Q56NI9 601 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 FBXW12Q6X9E4 464 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 C6orf201Q7Z4U5 140 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 OR8H3Q8N146 312 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 WDR89Q96FK6 387 aaPredicted RBP18.1■□□□□ 0.49
PTPRF-207ENST00000436724 ZNF69Q9UC07 566 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 SLC25A15Q9Y619 301 aa18.1■□□□□ 0.49
PTPRF-207ENST00000436724 ESPL1Q14674 2120 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 IGHV1-18A0A0C4DH31 117 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 A0A0G2JNJ9 132 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 SNRPGP15A8MWD9 76 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 EEF1E1-BLOC1S5C9J1V9 151 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 CSN2P05814 226 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 ZNF35P13682 527 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 SIGIRRQ6IA17 410 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 SLC36A1Q7Z2H8 476 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 PXT1Q8NFP0 134 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 PECRQ9BY49 303 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 Q9UFV3 132 aa18.09■□□□□ 0.49
PTPRF-207ENST00000436724 HEATR1Q9H583 2144 aaKnown RBP18.09■□□□□ 0.49
PTPRF-207ENST00000436724 J3QW42 95 aa18.08■□□□□ 0.49
PTPRF-207ENST00000436724 IGLV1-44P01699 117 aa18.08■□□□□ 0.49
PTPRF-207ENST00000436724 PDCD1Q15116 288 aa18.08■□□□□ 0.49
PTPRF-207ENST00000436724 NKAPLQ5M9Q1 402 aa18.08■□□□□ 0.49
PTPRF-207ENST00000436724 FBXL14Q8N1E6 418 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms