RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 BMXP51813 675 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 CAPZA1P52907 286 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 RPL31P62899 125 aaKnown RBP13.88□□□□□ -0.19
CPSF4-203ENST00000430038 BCL2L15Q5TBC7 163 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 NCR3LG1Q68D85 454 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 DHRS7BQ6IAN0 325 aaPredicted RBP13.88□□□□□ -0.19
CPSF4-203ENST00000430038 LHFPL4Q7Z7J7 247 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 CATSPERDQ86XM0 798 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 PRSS35Q8N3Z0 413 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 OR2T27Q8NH04 317 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 TRMT10AQ8TBZ6 339 aaKnown RBP13.88□□□□□ -0.19
CPSF4-203ENST00000430038 TCF7L1Q9HCS4 588 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 MTCH1Q9NZJ7 389 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 AP4S1Q9Y587 144 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 SNX5Q9Y5X3 404 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 SLC22A31A6NKX4 558 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 ZNF670-ZNF695F2Z2N8 137 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 CHST1O43916 411 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 INMTO95050 263 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 TK1P04183 234 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 TGFBR2P37173 567 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 ZNF573Q86YE8 665 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 RDH10Q8IZV5 341 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 ZNF561Q8N587 486 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 ITFG2Q969R8 447 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 H2AFY2Q9P0M6 372 aaPredicted RBP13.87□□□□□ -0.19
CPSF4-203ENST00000430038 OR14J1Q9UGF5 321 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 SF3B6Q9Y3B4 125 aaKnown RBP13.87□□□□□ -0.19
CPSF4-203ENST00000430038 PLXNB1O43157 2135 aa13.87□□□□□ -0.19
CPSF4-203ENST00000430038 M0QZ24 198 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 NXPH2O95156 264 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 PAHP00439 452 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 PIPP12273 146 aaPredicted RBP13.86□□□□□ -0.19
CPSF4-203ENST00000430038 FASP25445 335 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 KIR3DL2P43630 455 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 COL10A1Q03692 680 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 ZNF85Q03923 595 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 SMIM21Q3B7S5 101 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 ZNF782Q6ZMW2 699 aaPredicted RBP13.86□□□□□ -0.19
CPSF4-203ENST00000430038 TCF23Q7RTU1 214 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 RNF144BQ7Z419 303 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 YIPF7Q8N8F6 280 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 OR5D13Q8NGL4 314 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 EME1Q96AY2 570 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 MNTQ99583 582 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 MMP27Q9H306 513 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 MOB1AQ9H8S9 216 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 IL36RNQ9UBH0 155 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 FBLN5Q9UBX5 448 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 FOXJ3Q9UPW0 622 aa13.86□□□□□ -0.19
CPSF4-203ENST00000430038 FAM230AA0A1W2PPH8 454 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 FAM90A8PA6NJQ4 464 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 K7N7A8 449 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 TIMM23O14925 209 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 ZNF737O75373 536 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 JUNBP17275 347 aaPredicted RBP13.85□□□□□ -0.19
CPSF4-203ENST00000430038 COX7A1P24310 79 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 HTR1FP30939 366 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 RAB13P51153 203 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 ISL1P61371 349 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 BLMHQ13867 455 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 CCBE1Q6UXH8 406 aaPredicted RBP13.85□□□□□ -0.19
CPSF4-203ENST00000430038 C1QL4Q86Z23 238 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 ZDHHC13Q8IUH4 622 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 OR5R1Q8NH85 324 aa13.85□□□□□ -0.19
CPSF4-203ENST00000430038 FAM110DQ8TAY7 271 aaPredicted RBP13.85□□□□□ -0.19
CPSF4-203ENST00000430038 WARS2Q9UGM6 360 aaKnown RBP13.85□□□□□ -0.19
CPSF4-203ENST00000430038 TMEM82A0PJX8 343 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 BTBD17A6NE02 478 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 ANKRD61A6NGH8 418 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 METTL15A6NJ78 407 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 DHRS7CA6NNS2 312 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 C17orf98A8MV24 154 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 SLC1A7O00341 560 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 EFNB2P52799 333 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 IL24Q13007 206 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 GID4Q8IVV7 300 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 SLAMF9Q96A28 289 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 OSBPL10Q9BXB5 764 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 GABARAPL3Q9BY60 117 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 AASSQ9UDR5 926 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 OAZ3Q9UMX2 235 aa13.84□□□□□ -0.19
CPSF4-203ENST00000430038 IGKV1-9A0A0C4DH69 117 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 E9PQ18 207 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 KRT8P05787 483 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 OR2T7P0C7T2 308 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 CALCBP10092 127 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 NPBWR2P48146 333 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 LRRC75BQ2VPJ9 315 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 TP53I3Q53FA7 332 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 C11orf44Q8N8P7 122 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 OR10H4Q8NGA5 316 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 OR52N4Q8NGI2 321 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 ADAT3Q96EY9 351 aaPredicted RBP13.83□□□□□ -0.2
CPSF4-203ENST00000430038 PRRG3Q9BZD7 231 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 PKIBQ9C010 78 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 RIBC2Q9H4K1 309 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 POLDIP2Q9Y2S7 368 aa13.83□□□□□ -0.2
CPSF4-203ENST00000430038 NOTCH3Q9UM47 2321 aa13.82□□□□□ -0.2
CPSF4-203ENST00000430038 SAC3D1A6NKF1 404 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms