RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CNN3Q15417 329 aaKnown RBP16.74■□□□□ 0.27
GTF3A-202ENST00000419181 OGFRL1Q5TC84 451 aaPredicted RBP16.74■□□□□ 0.27
GTF3A-202ENST00000419181 UTS2BQ765I0 119 aa16.74■□□□□ 0.27
GTF3A-202ENST00000419181 CD177Q8N6Q3 437 aa16.74■□□□□ 0.27
GTF3A-202ENST00000419181 KIR3DL3Q8N743 410 aa16.74■□□□□ 0.27
GTF3A-202ENST00000419181 OR51A4Q8NGJ6 313 aa16.74■□□□□ 0.27
GTF3A-202ENST00000419181 CNIH3Q8TBE1 160 aa16.74■□□□□ 0.27
GTF3A-202ENST00000419181 H1FXQ92522 213 aaKnown RBP16.74■□□□□ 0.27
GTF3A-202ENST00000419181 FGF20Q9NP95 211 aaPredicted RBP16.74■□□□□ 0.27
GTF3A-202ENST00000419181 ANK2Q01484 3957 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 IGKV1-9A0A0C4DH69 117 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 DNAJC9-AS1A6NH13 148 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 E9PI62 339 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 HAX1O00165 279 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 NDUFB7P17568 137 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 MRPL28Q13084 256 aaKnown RBP16.73■□□□□ 0.27
GTF3A-202ENST00000419181 RUSC1-AS1Q66K80 236 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 DHRSXQ8N5I4 330 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 DNAAF1Q8NEP3 725 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 TMEM185AQ8NFB2 350 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 FGGYQ96C11 551 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 BORCS8Q96FH0 119 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 PRDM13Q9H4Q3 707 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 MTCH1Q9NZJ7 389 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 ONECUT1Q9UBC0 465 aa16.73■□□□□ 0.27
GTF3A-202ENST00000419181 ZFPL1O95159 310 aa16.72■□□□□ 0.27
GTF3A-202ENST00000419181 ZNF20P17024 532 aa16.72■□□□□ 0.27
GTF3A-202ENST00000419181 PRTN3P24158 256 aa16.72■□□□□ 0.27
GTF3A-202ENST00000419181 PRDX2P32119 198 aa16.72■□□□□ 0.27
GTF3A-202ENST00000419181 ACTG1P63261 375 aa16.72■□□□□ 0.27
GTF3A-202ENST00000419181 BAMBIQ13145 260 aa16.72■□□□□ 0.27
GTF3A-202ENST00000419181 VMO1Q7Z5L0 202 aa16.72■□□□□ 0.27
GTF3A-202ENST00000419181 BATF2Q8N1L9 274 aa16.72■□□□□ 0.27
GTF3A-202ENST00000419181 ZNF561Q8N587 486 aa16.72■□□□□ 0.27
GTF3A-202ENST00000419181 ZNF676Q8N7Q3 588 aa16.72■□□□□ 0.27
GTF3A-202ENST00000419181 SETD9Q8NE22 299 aa16.72■□□□□ 0.27
GTF3A-202ENST00000419181 ZMAT3Q9HA38 289 aaKnown RBP16.72■□□□□ 0.27
GTF3A-202ENST00000419181 ELL3Q9HB65 397 aaPredicted RBP16.72■□□□□ 0.27
GTF3A-202ENST00000419181 IGHV1-69DA0A0B4J2H0 117 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 MDFIC2A0A1B0GVS7 189 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 TMEM212A6NML5 194 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 CLDN34H7C241 214 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 SLC1A7O00341 560 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 IGHV1-69P01742 117 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 ATF1P18846 271 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 DCKP27707 260 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 CEBPDP49716 269 aaPredicted RBP16.71■□□□□ 0.27
GTF3A-202ENST00000419181 RBP2P50120 134 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 IL18R1Q13478 541 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 DEFB112Q30KQ8 113 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 SLC25A26Q70HW3 274 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 CMTM4Q8IZR5 234 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 Q8N7P7 452 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 OR13C3Q8NGS6 347 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 HAVCR2Q8TDQ0 301 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 GATAD2BQ8WXI9 593 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 LHX4Q969G2 390 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 CEP19Q96LK0 163 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 DUX5Q96PT3 197 aa16.71■□□□□ 0.27
GTF3A-202ENST00000419181 TRBV23-1A0A0A0MS06 115 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 F8VVB4 439 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 F8VWA3 439 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 KNG1P01042 644 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 CCDC159P0C7I6 412 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 PRKACBP22694 351 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 AZGP1P25311 298 aaKnown RBP16.7■□□□□ 0.26
GTF3A-202ENST00000419181 GBX2P52951 348 aaPredicted RBP16.7■□□□□ 0.26
GTF3A-202ENST00000419181 ATP1B3P54709 279 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 METAP1DQ6UB28 335 aaPredicted RBP16.7■□□□□ 0.26
GTF3A-202ENST00000419181 C12orf54Q6X4T0 127 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 SLAMF9Q96A28 289 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 SPSB1Q96BD6 273 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 PDCD1LG2Q9BQ51 273 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 HSPE1-MOB4S4R3N1 261 aa16.7■□□□□ 0.26
GTF3A-202ENST00000419181 A0A1W2PQ09 198 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 IRGMA1A4Y4 181 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 TMEM89A2RUT3 159 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 H0YAE9 185 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 RNASE1P07998 156 aaKnown RBP16.69■□□□□ 0.26
GTF3A-202ENST00000419181 RPSAP08865 295 aaKnown RBP16.69■□□□□ 0.26
GTF3A-202ENST00000419181 CAPGP40121 348 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 COMPP49747 757 aaPredicted RBP16.69■□□□□ 0.26
GTF3A-202ENST00000419181 ETV1P50549 477 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 CAPZA1P52907 286 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 MTCP1P56278 107 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 GABPB1Q06547 395 aaPredicted RBP16.69■□□□□ 0.26
GTF3A-202ENST00000419181 SLC9A3R2Q15599 337 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 C1orf122Q6ZSJ8 110 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 LHFPL2Q6ZUX7 228 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 OR5AK2Q8NH90 309 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 COMMD4Q9H0A8 199 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 DCLRE1BQ9H816 532 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 SIRT7Q9NRC8 400 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 OR14J1Q9UGF5 321 aa16.69■□□□□ 0.26
GTF3A-202ENST00000419181 DIMT1Q9UNQ2 313 aaKnown RBP16.69■□□□□ 0.26
GTF3A-202ENST00000419181 CAB39Q9Y376 341 aaPredicted RBP16.69■□□□□ 0.26
GTF3A-202ENST00000419181 M0R1W7 72 aa16.68■□□□□ 0.26
GTF3A-202ENST00000419181 MT-ND2P03891 347 aa16.68■□□□□ 0.26
GTF3A-202ENST00000419181 GNAO1P09471 354 aa16.68■□□□□ 0.26
GTF3A-202ENST00000419181 GTF2A1P52655 376 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms