RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 SAMD12Q8N8I0 201 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 CNEP1R1Q8N9A8 125 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZIC4Q8N9L1 334 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR8B12Q8NGG6 310 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR5M9Q8NGP3 310 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 AKR7LQ8NHP1 331 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 LGALS14Q8TCE9 139 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 RGP1Q92546 391 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 NABP1Q96AH0 204 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 PHF21AQ96BD5 680 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF799Q96GE5 643 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 GMPPAQ96IJ6 420 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 FAM71F1Q96KD3 344 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 GPR137Q96N19 417 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 WDFY2Q96P53 400 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 SH3GL3Q99963 347 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC30A2Q9BRI3 323 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 CCDC32Q9BV29 185 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 BARHL1Q9BZE3 327 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 PBOV1Q9GZY1 135 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ESRP2Q9H6T0 727 aaKnown RBP3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ABCB9Q9NP78 766 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ABCB10Q9NRK6 738 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 GLRX2Q9NS18 164 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC7A10Q9NS82 523 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 DDX28Q9NUL7 540 aaKnown RBP3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 FAM206AQ9NX38 181 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 TAS2R4Q9NYW5 299 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 ABRACLQ9P1F3 81 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 CLCF1Q9UBD9 225 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 EXTL2Q9UBQ6 330 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 NUFIP1Q9UHK0 495 aaKnown RBP3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 FOXJ3Q9UPW0 622 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 GAB2Q9UQC2 676 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 TP53TG5Q9Y2B4 290 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 V9GY05 133 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 USP34Q70CQ2 3546 aa3.25□□□□□ -1.89
HMGB3P20-201ENST00000417997 NCOR1O75376 2440 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 CIB4A0PJX0 185 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR6C6A6NF89 314 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 FABP12A6NFH5 140 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ANKRD61A6NGH8 418 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 TEX22C9J3V5 150 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 J3KRW8 73 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 AIPO00170 330 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 CTDSP2O14595 271 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 MAGEB3O15480 346 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 XRCC2O43543 280 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 WDR1O75083 606 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 SRSF10O75494 262 aaKnown RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 MTRF1O75570 445 aaKnown RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 UPK1BO75841 260 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 TGM6O95932 706 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 PNPP00491 289 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 APOA1P02647 267 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 TTRP02766 147 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ISG15P05161 165 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 HEXAP06865 529 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 PRSS1P07477 247 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ERCC1P07992 297 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 HCKP08631 526 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ACSM4P0C7M7 580 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 CFC1BP0CG36 223 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 CFC1P0CG37 223 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 CALCBP10092 127 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC2A2P11168 524 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 CD79AP11912 226 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 GABRA1P14867 456 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 RAB3AP20336 220 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 AGAP20933 346 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 PTGER4P35408 488 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 APLNRP35414 380 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ARR3P36575 388 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ETV6P41212 452 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 MAGEB1P43366 347 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR3A2P47893 321 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 GLIPR1P48060 266 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 UBE2NP61088 152 aaKnown RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ARF1P84077 181 aaKnown RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 TGFBR3Q03167 851 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 RBPJQ06330 500 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 MADCAM1Q13477 382 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 RAB11BQ15907 218 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF181Q2M3W8 571 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 TRIM16LQ309B1 348 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC25A35Q3KQZ1 300 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ACSF3Q4G176 576 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 CCDC92Q53HC0 331 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 PYDC2Q56P42 97 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 UBE2NLQ5JXB2 153 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 C1orf185Q5T7R7 199 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 FAM27BQ5VT28 67 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 FBXW9Q5XUX1 488 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF774Q6NX45 483 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 RPUSD3Q6P087 351 aaKnown RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 CNIH2Q6PI25 160 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 DRAM2Q6UX65 266 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 UNQ9370/PRO34162Q6UXP9 181 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 GFRALQ6UXV0 394 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 BAIAP2L2Q6UXY1 529 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms