RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 CCL3P10147 92 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 LAMP1P11279 417 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 IRF2P14316 349 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 GABRA1P14867 456 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 ABOP16442 354 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 GSTM3P21266 225 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 GPX3P22352 226 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 CCNOP22674 350 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 GABRR1P24046 479 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 PIGAP37287 484 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 APOBEC1P41238 236 aaKnown RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 MAGEA2P43356 314 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 DNASE1L1P49184 302 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 CYB561P49447 251 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 EMDP50402 254 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 IDH3GP51553 393 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 PRKXP51817 358 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 FBXW4P57775 412 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 SRSF3P84103 164 aaKnown RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 EMX2Q04743 252 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 FAM27E3Q08E93 113 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 FABP9Q0Z7S8 132 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 MAD2L1BPQ15013 274 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 RBMS2Q15434 407 aaKnown RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 OR8G1Q15617 311 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 TRAM1Q15629 374 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 MPPED2Q15777 294 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 SPDYE7PQ495Y7 208 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 FHL5Q5TD97 284 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 GPR157Q5UAW9 335 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 RNLSQ5VYX0 342 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 CYB5R2Q6BCY4 276 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 OR4F3Q6IEY1 312 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 OR2A2Q6IF42 318 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF367Q7RTV3 350 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 DPY19L4Q7Z388 723 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 UEVLDQ8IX04 471 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 LGI4Q8N135 537 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 MUC20Q8N307 709 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 SPICQ8N5J4 248 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 GCSAMQ8N6F7 178 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF615Q8N8J6 731 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF441Q8N8Z8 693 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 OR10G3Q8NGC4 313 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 OR13C9Q8NGT0 318 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 OR52I2Q8NH67 350 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 NUBPLQ8TB37 319 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 FAM110BQ8TC76 370 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF675Q8TD23 568 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 CA5BP1Q8WTZ4 195 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 ASB13Q8WXK3 278 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 SMPDL3BQ92485 455 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 ADIPOR1Q96A54 375 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 ZBED6CLQ96FA7 236 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 SMIM8Q96KF7 97 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 TEX37Q96LM6 180 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 CCDC115Q96NT0 180 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 AMDHD1Q96NU7 426 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 MS4A4EQ96PG1 132 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 TMEM208Q9BTX3 173 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 C20orf24Q9BUV8 137 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 C1QTNF6Q9BXI9 259 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 NXF5Q9H1B4 397 aaKnown RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 Q9H8V8 135 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 MTHFD2LQ9H903 347 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 GAR1Q9NY12 217 aaKnown RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 RASL12Q9NYN1 266 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 RCC2Q9P258 522 aaKnown RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 PITPNC1Q9UKF7 332 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 FBXL3Q9UKT7 428 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 YARS2Q9Y2Z4 477 aaKnown RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 FBXO7Q9Y3I1 522 aa3.95□□□□□ -1.78
SF3B1-202ENST00000409915 HELZ2Q9BYK8 2649 aaKnown RBP3.95□□□□□ -1.78
SF3B1-202ENST00000409915 UBR5O95071 2799 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-202ENST00000409915 MYO18BQ8IUG5 2567 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 TRAV18A0A075B6X5 111 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 A0A087WUJ7 227 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 TRBV5-7A0A0A0MS05 114 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 C17orf51A8MQB3 221 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 FAM166BA8MTA8 275 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 C5orf58C9J3I9 102 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 MCRIP1C9JLW8 97 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF670-ZNF695F2Z2N8 137 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 J3QKU1 62 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 TP53I11O14683 189 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 KIAA0513O60268 411 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 OR2A4O95047 310 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 CST1P01037 141 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 C1QCP02747 245 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 SP1P08047 785 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 GP9P14770 177 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 TBXA2RP21731 343 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 GNLYP22749 145 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 ACKR3P25106 362 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 SRD5A2P31213 254 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 FMO3P31513 532 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 TGFBR1P36897 503 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 MNDAP41218 407 aa3.94□□□□□ -1.78
SF3B1-202ENST00000409915 NAA10P41227 235 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms