RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 EGR1P18146 543 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 PTGFRP43088 359 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 HNRNPA0Q13151 305 aaKnown RBP11.43□□□□□ -0.58
SNU13-204ENST00000402458 ZNF404Q494X3 552 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 SPNS3Q6ZMD2 512 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 LRRTM1Q86UE6 522 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 C19orf18Q8NEA5 215 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 PXT1Q8NFP0 134 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 OR13F1Q8NGS4 319 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 C12orf43Q96C57 262 aaKnown RBP11.43□□□□□ -0.58
SNU13-204ENST00000402458 RAB39BQ96DA2 213 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 KCTD7Q96MP8 289 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 NRIP2Q9BQI9 281 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 RHOFQ9HBH0 211 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 ING4Q9UNL4 249 aa11.43□□□□□ -0.58
SNU13-204ENST00000402458 IGHV3OR15-7A0A075B7D8 119 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 IGHV4-61A0A0C4DH41 118 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 NKX6-3A6NJ46 265 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 WNT9BO14905 357 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 ANGPTL7O43827 346 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 TFAP2AP05549 437 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 CPT2P23786 658 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 RBMXP38159 391 aaKnown RBP11.42□□□□□ -0.58
SNU13-204ENST00000402458 RPL5P46777 297 aaKnown RBP11.42□□□□□ -0.58
SNU13-204ENST00000402458 OR3A4PP47883 348 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 ALDH3B2P48448 385 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 BMXP51813 675 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 ZP1P60852 638 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 LOXL1Q08397 574 aaPredicted RBP11.42□□□□□ -0.58
SNU13-204ENST00000402458 RSU1Q15404 277 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 TEX36Q5VZQ5 186 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 ACP7Q6ZNF0 438 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 DCDC5Q6ZRR9 648 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 NLRC3Q7RTR2 1065 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 FAM90A1Q86YD7 464 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 CLDND2Q8NHS1 167 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 EMG1Q92979 244 aaKnown RBP11.42□□□□□ -0.58
SNU13-204ENST00000402458 ZNF488Q96MN9 340 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 TMEM246Q9BRR3 403 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 METTL9Q9H1A3 318 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 TMEM165Q9HC07 324 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 MTCH1Q9NZJ7 389 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 NLKQ9UBE8 527 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 MIOXQ9UGB7 285 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 GLS2Q9UI32 602 aa11.42□□□□□ -0.58
SNU13-204ENST00000402458 OR2AT4A6NND4 320 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 H7C1Q1 480 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 ZNF780AO75290 641 aaPredicted RBP11.41□□□□□ -0.58
SNU13-204ENST00000402458 KDM4BO94953 1096 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 GYPAP02724 150 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 CSTBP04080 98 aaKnown RBP11.41□□□□□ -0.58
SNU13-204ENST00000402458 RPS2P15880 293 aaKnown RBP11.41□□□□□ -0.58
SNU13-204ENST00000402458 ADRA2CP18825 462 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 RAB3BP20337 219 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 BCL3P20749 454 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 MTNR1BP49286 362 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 GPR176Q14439 515 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 AWAT2Q6E213 333 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 RNF144BQ7Z419 303 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 TPRA1Q86W33 373 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 FAM58AQ8N1B3 248 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 BATF2Q8N1L9 274 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 FUNDC2Q9BWH2 189 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 DNTTIP1Q9H147 329 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 WDR13Q9H1Z4 485 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 ZNF665Q9H7R5 613 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 CNTD2Q9H8S5 307 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 PLGRKTQ9HBL7 147 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 MRPS28Q9Y2Q9 187 aaKnown RBP11.41□□□□□ -0.58
SNU13-204ENST00000402458 AK6Q9Y3D8 172 aaKnown RBP11.41□□□□□ -0.58
SNU13-204ENST00000402458 V9GY05 133 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 MYO9AB2RTY4 2548 aa11.41□□□□□ -0.58
SNU13-204ENST00000402458 TEX15Q9BXT5 2789 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 CEACAM18A8MTB9 384 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.4□□□□□ -0.58
SNU13-204ENST00000402458 SMAD7O15105 426 aaKnown RBP11.4□□□□□ -0.58
SNU13-204ENST00000402458 ADAM20O43506 726 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 KNG1P01042 644 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 UBBP0CG47 229 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 PRKACAP17612 351 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 GABRA2P47869 451 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 ERVK11-1P61568 191 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 HOXA4Q00056 320 aaPredicted RBP11.4□□□□□ -0.58
SNU13-204ENST00000402458 GLIPR1L1Q6UWM5 242 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 SLC36A1Q7Z2H8 476 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 OR8B3Q8NGG8 313 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 OR6M1Q8NGM8 313 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 NEIL1Q96FI4 390 aaPredicted RBP11.4□□□□□ -0.58
SNU13-204ENST00000402458 OR8B2Q96RD0 313 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 NKX3-1Q99801 234 aaPredicted RBP11.4□□□□□ -0.58
SNU13-204ENST00000402458 PATZ1Q9HBE1 687 aaKnown RBP11.4□□□□□ -0.58
SNU13-204ENST00000402458 HES4Q9HCC6 221 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 RBFOX1Q9NWB1 397 aaKnown RBP11.4□□□□□ -0.58
SNU13-204ENST00000402458 IL36GQ9NZH8 169 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 GHRLQ9UBU3 117 aa11.4□□□□□ -0.58
SNU13-204ENST00000402458 IGKV1-12A0A0C4DH73 117 aa11.39□□□□□ -0.59
SNU13-204ENST00000402458 TMPRSS2O15393 492 aa11.39□□□□□ -0.59
SNU13-204ENST00000402458 NOL3O60936 208 aaKnown RBP11.39□□□□□ -0.59
SNU13-204ENST00000402458 CDRT1O95170 752 aa11.39□□□□□ -0.59
SNU13-204ENST00000402458 HTR3BO95264 441 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms