RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 FBXW12Q6X9E4 464 aa15.02□□□□□ -0.01
PTPRA-205ENST00000399903 C1QL4Q86Z23 238 aa15.02□□□□□ -0.01
PTPRA-205ENST00000399903 NECAP1Q8NC96 275 aa15.02□□□□□ -0.01
PTPRA-205ENST00000399903 OR5L1Q8NGL2 311 aa15.02□□□□□ -0.01
PTPRA-205ENST00000399903 AK3Q9UIJ7 227 aa15.02□□□□□ -0.01
PTPRA-205ENST00000399903 FAM221AA4D161 298 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 CDC14BO60729 498 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 PTBP3O95758 552 aaKnown RBP15.01□□□□□ -0.01
PTPRA-205ENST00000399903 LYL1P12980 280 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 HSD11B1P28845 292 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 OPRM1P35372 400 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 RND3P61587 244 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 RNF4P78317 190 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 ROM1Q03395 351 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 ZNF440Q8IYI8 595 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 DAZLQ92904 295 aaKnown RBP15.01□□□□□ -0.01
PTPRA-205ENST00000399903 C5orf34Q96MH7 638 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 SCRT1Q9BWW7 348 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 VN1R1Q9GZP7 353 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 NXT1Q9UKK6 140 aaKnown RBP15.01□□□□□ -0.01
PTPRA-205ENST00000399903 SLC7A11Q9UPY5 501 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 PCNX3Q9H6A9 2034 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 TCEAL6Q6IPX3 200 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 ABHD5Q8WTS1 349 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 PBOV1Q9GZY1 135 aa15.01□□□□□ -0.01
PTPRA-205ENST00000399903 IGKV1D-43A0A0B4J1Z2 117 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 TTRP02766 147 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 MMP9P14780 707 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 ZNF25P17030 456 aaPredicted RBP15□□□□□ -0.01
PTPRA-205ENST00000399903 CD38P28907 300 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 APOBEC1P41238 236 aaKnown RBP15□□□□□ -0.01
PTPRA-205ENST00000399903 NOVA1P51513 510 aaKnown RBP15□□□□□ -0.01
PTPRA-205ENST00000399903 PCK2Q16822 640 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 C1orf189Q5VU69 101 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 EMG1Q92979 244 aaKnown RBP15□□□□□ -0.01
PTPRA-205ENST00000399903 LANCL2Q9NS86 450 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 KCNIP3Q9Y2W7 256 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 THADAQ6YHU6 1953 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 HSPB2A8KAH6 182 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 CLDN4O14493 209 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 ONECUT2O95948 504 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 SEC11BP0C7V7 166 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 CFPP27918 469 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 OR1D5P58170 312 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 RAB11AP62491 216 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 ZNF117Q03924 483 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 HSPB2Q16082 182 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 COMMD1Q8N668 190 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 TSLPQ969D9 159 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 MVB12AQ96EY5 273 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 WFIKKN1Q96NZ8 548 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 MAGT1Q9H0U3 335 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 WSB1Q9Y6I7 421 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 IGKV1D-8A0A087WSZ0 117 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 ZNF850A8MQ14 1090 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 C17orf105B2RV13 164 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 E5RGE8 158 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 NPIPA5E9PKD4 350 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 MBP02144 154 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 CHRM2P08172 466 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 TMEM225BP0DP42 221 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 COX5BP10606 129 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 GP1BBP13224 206 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 MPZP25189 248 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 ALDH3B1P43353 468 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 PIGPP57054 158 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 VAX1Q5SQQ9 334 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 KCNG3Q8TAE7 436 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 PTX4Q96A99 478 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 HIST1H2BLQ99880 126 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 URM1Q9BTM9 101 aaKnown RBP15□□□□□ -0.01
PTPRA-205ENST00000399903 OR14J1Q9UGF5 321 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 PADI1Q9ULC6 663 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 NPIPA1Q9UND3 350 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 NSG2Q9Y328 171 aa15□□□□□ -0.01
PTPRA-205ENST00000399903 FAM24AA6NFZ4 105 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 BGLAPP02818 100 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 BLKP51451 505 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 RRADP55042 308 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 POU3F1Q03052 451 aaPredicted RBP14.99□□□□□ -0.01
PTPRA-205ENST00000399903 TBL1XR1Q9BZK7 514 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 OR10A2Q9H208 303 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 GAB2Q9UQC2 676 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 TRAV36DV7A0A075B6V5 113 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 ADAM10O14672 748 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 OR5AC1P0C628 307 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 RPL23AP62750 156 aaKnown RBP14.99□□□□□ -0.01
PTPRA-205ENST00000399903 BRICD5Q6PL45 260 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 SYT13Q7L8C5 426 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 C6orf201Q7Z4U5 140 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 OR52M1Q8NGK5 317 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 STT3BQ8TCJ2 826 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 SLAMF6Q96DU3 332 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 PLEKHA2Q9HB19 425 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 PRODH2Q9UF12 536 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 SHANK1Q9Y566 2161 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 NCOR1O75376 2440 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 FIGNL2A6NMB9 653 aa14.99□□□□□ -0.01
PTPRA-205ENST00000399903 RPS2P15880 293 aaKnown RBP14.99□□□□□ -0.01
PTPRA-205ENST00000399903 P2RY1P47900 373 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms