RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 METTL15P1P0C7V9 234 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 IL9P15248 144 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 GDF1P27539 372 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 NTSP30990 170 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 TMBIM6P55061 237 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 RAB2AP61019 212 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 RPS27AP62979 156 aaKnown RBP5.6□□□□□ -1.51
SMCO1-201ENST00000397537 ZNF154Q13106 437 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 GPRC6AQ5T6X5 926 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 TMEM42Q69YG0 159 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 LPCAT3Q6P1A2 487 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 ZNF585AQ6P3V2 769 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 FAM131AQ6UXB0 335 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 AMIGO2Q86SJ2 522 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 TMEM135Q86UB9 458 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 PIM3Q86V86 326 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 CARM1Q86X55 608 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 PIANPQ8IYJ0 282 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 ZNF283Q8N7M2 679 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 OR10W1Q8NGF6 305 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 OR8J3Q8NGG0 315 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 SMIM12Q96EX1 92 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 GABRG3Q99928 467 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 ZNF391Q9UJN7 358 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 SCP2D1Q9UJQ7 156 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 ZFYVE26Q68DK2 2539 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 VPS13AQ96RL7 3174 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 SMIM9A6NGZ8 99 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 NME4O00746 187 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 ATP6V0E1O15342 81 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 ENTPD6O75354 484 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 RLN2P04090 185 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 SNHG28P0DPA3 235 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 MUC1P15941 1255 aaPredicted RBP5.6□□□□□ -1.51
SMCO1-201ENST00000397537 SERPINA2P20848 420 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 PTH2RP49190 550 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 PKIAP61925 76 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 ST3GAL4Q11206 333 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 SPA17Q15506 151 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 MICAQ29983 383 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 FAM27D1Q5T7N8 215 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 FHL5Q5TD97 284 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 FBXW9Q5XUX1 488 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 WDR82Q6UXN9 313 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 TMEM144Q7Z5S9 345 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 PRR22Q8IZ63 422 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 MTURNQ8N3F0 131 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 OR2G2Q8NGZ5 317 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 TCTEX1D2Q8WW35 142 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 EEF1AKMT3Q96AZ1 226 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 RCHY1Q96PM5 261 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 MRPL45Q9BRJ2 306 aaKnown RBP5.6□□□□□ -1.51
SMCO1-201ENST00000397537 AMBNQ9NP70 447 aa5.6□□□□□ -1.51
SMCO1-201ENST00000397537 SPANXB1Q9NS25 103 aaPredicted RBP5.6□□□□□ -1.51
SMCO1-201ENST00000397537 DMDP11532 3685 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 FAM166BA8MTA8 275 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 UBDO15205 165 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 BUB3O43684 328 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 SSNA1O43805 119 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 TBX6O95947 436 aaPredicted RBP5.59□□□□□ -1.51
SMCO1-201ENST00000397537 IFNA7P01567 189 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 RPL35AP18077 110 aaKnown RBP5.59□□□□□ -1.51
SMCO1-201ENST00000397537 SLC6A1P30531 599 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 UBE2E1P51965 193 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 VSX2P58304 361 aaPredicted RBP5.59□□□□□ -1.51
SMCO1-201ENST00000397537 TAS2R39P59534 338 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 DYNLL1P63167 89 aaKnown RBP5.59□□□□□ -1.51
SMCO1-201ENST00000397537 SLC7A9P82251 487 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 CCL14Q16627 93 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 ZNF260Q3ZCT1 412 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 REP15Q6BDI9 236 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 TMEM179Q6ZVK1 233 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 SKA3Q8IX90 412 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 CPNE9Q8IYJ1 553 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 TCTE3Q8IZS6 198 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 TMEM199Q8N511 208 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 OR4M2Q8NGB6 313 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 HAVCR2Q8TDQ0 301 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 DEDD2Q8WXF8 326 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 RERGQ96A58 199 aaPredicted RBP5.59□□□□□ -1.51
SMCO1-201ENST00000397537 DNAJC19Q96DA6 116 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 MED8Q96G25 268 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 URB1-AS1Q96HZ7 61 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 POM121L2Q96KW2 1035 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 UBE2E2Q96LR5 201 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 FAM173AQ9BQD7 235 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 TMPRSS5Q9H3S3 457 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 PPDPFQ9H3Y8 114 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 NT5DC2Q9H857 520 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 NMNAT1Q9HAN9 279 aaPredicted RBP5.59□□□□□ -1.51
SMCO1-201ENST00000397537 MED11Q9P086 117 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 TMEM216Q9P0N5 145 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 DKKL1Q9UK85 242 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 SPTBN2O15020 2390 aa5.59□□□□□ -1.51
SMCO1-201ENST00000397537 EP300Q09472 2414 aaPredicted RBP5.59□□□□□ -1.52
SMCO1-201ENST00000397537 CEP250Q9BV73 2442 aa5.59□□□□□ -1.52
SMCO1-201ENST00000397537 MYH4Q9Y623 1939 aa5.59□□□□□ -1.52
SMCO1-201ENST00000397537 A0A1W2PPI3 338 aa5.58□□□□□ -1.52
SMCO1-201ENST00000397537 EPOPA6NHQ4 379 aa5.58□□□□□ -1.52
SMCO1-201ENST00000397537 ZNF587BE7ETH6 402 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms