RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 NANOS3P60323 173 aaKnown RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 SURF2Q15527 256 aaPredicted RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 TMEM42Q69YG0 159 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ASPHD2Q6ICH7 369 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 SLC16A14Q7RTX9 510 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 LYG2Q86SG7 212 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 SLC25A42Q86VD7 318 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 GPR137CQ8N3F9 429 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 OR51A7Q8NH64 312 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 CPT1CQ8TCG5 803 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 MITD1Q8WV92 249 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 SEC22AQ96IW7 307 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 KIRREL1Q96J84 757 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ULBP3Q9BZM4 244 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 PARP12Q9H0J9 701 aaKnown RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 SLCO5A1Q9H2Y9 848 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 HRH4Q9H3N8 390 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 RGCCQ9H4X1 137 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 GLRX2Q9NS18 164 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 GNG8Q9UK08 70 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 KLHDC2Q9Y2U9 406 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ADAM18Q9Y3Q7 739 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 KNL1Q8NG31 2342 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 A0A1W2PPE2 198 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 C7orf77A4D0Y5 90 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 PATE3B3GLJ2 98 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 M0R036 132 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 NEURL1O76050 574 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ZFPL1O95159 310 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 IGHG1P01857 330 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ARG1P05089 322 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 GYPBP06028 91 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 CRHP06850 196 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ITGA5P08648 1049 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 CCL4P13236 92 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ZNF25P17030 456 aaPredicted RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 ACTBP60709 375 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 PKIAP61925 76 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ACTG1P63261 375 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 MFAP5Q13361 173 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 OR8G1Q15617 311 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 AWAT1Q58HT5 328 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 PRAMEF17Q5VTA0 474 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 AWAT2Q6E213 333 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 OR56B1Q8NGI3 324 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 OR10D4PQ8NGN7 298 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 OR13C8Q8NGS7 320 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ZNF563Q8TA94 476 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 DVL3Q92997 716 aaPredicted RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 RASD2Q96D21 266 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 FER1L6-AS2Q96M78 137 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ZNF587Q96SQ5 575 aaPredicted RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 SULT4A1Q9BR01 284 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 RNF126Q9BV68 326 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ARRDC1-AS1Q9H2J1 176 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ZNF703Q9H7S9 590 aaPredicted RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 SLC2A8Q9NY64 477 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 IL36GQ9NZH8 169 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 A0A0U1RQK1 487 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ZNF320A2RRD8 509 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 OR6C6A6NF89 314 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 MKRN2OSH3BPM6 223 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 DCTN6O00399 190 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 PHOX2AO14813 284 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 WISP1O95388 367 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 IFNA17P01571 189 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 HLA-AP01891 365 aaKnown RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 CFIP05156 583 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 WNT2P09544 360 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 PSMB6P28072 239 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 PRSS3P35030 304 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 PSMB10P40306 273 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 LPAR6P43657 344 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 EFNB2P52799 333 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 NDUFA6P56556 154 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 GAMTQ14353 236 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 RSU1Q15404 277 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 C1orf189Q5VU69 101 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 SLC35D2Q76EJ3 337 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 C1orf174Q8IYL3 243 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ZSCAN4Q8NAM6 433 aaPredicted RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 CYB561A3Q8NBI2 242 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 OR4K13Q8NH42 304 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 RRNAD1Q96FB5 475 aaKnown RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 AKR1E2Q96JD6 320 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 SCRT1Q9BWW7 348 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 NMES1Q9C002 83 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 OPN3Q9H1Y3 402 aaPredicted RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 PARP11Q9NR21 331 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 GAR1Q9NY12 217 aaKnown RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 NOP16Q9Y3C1 178 aaKnown RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 TVP23AA6NH52 213 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 SLC17A2O00624 439 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 TUSC2O75896 110 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 RAB3DO95716 219 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 IFNA2P01563 188 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 QDPRP09417 244 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 CEACAM1P13688 526 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 CTLA4P16410 223 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 S100A2P29034 98 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms