RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ALX4Q9H161 411 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 BANF2Q9H503 90 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 KCNN3Q9UGI6 736 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 FASNP49327 2511 aaKnown RBP12.97□□□□□ -0.33
SCAF11-204ENST00000395454 CST4P01036 141 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 HPXP02790 462 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 CD79AP11912 226 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-204ENST00000395454 CPT2P23786 658 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 GZMKP49863 264 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 NKX2-5P52952 324 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-204ENST00000395454 CBX3Q13185 183 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 C17orf78Q8N4C9 275 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 NUDCD2Q8WVJ2 157 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 POM121Q96HA1 1249 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 OCSTAMPQ9BR26 566 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 BEX2Q9BXY8 128 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 NKIRAS2Q9NYR9 191 aa12.97□□□□□ -0.33
SCAF11-204ENST00000395454 ANKHD1Q8IWZ3 2542 aaKnown RBP12.97□□□□□ -0.33
SCAF11-204ENST00000395454 OR5H1A6NKK0 313 aa12.96□□□□□ -0.33
SCAF11-204ENST00000395454 SERPINE3A8MV23 424 aa12.96□□□□□ -0.33
SCAF11-204ENST00000395454 AKR7A2O43488 359 aa12.96□□□□□ -0.33
SCAF11-204ENST00000395454 ZNF780AO75290 641 aaPredicted RBP12.96□□□□□ -0.33
SCAF11-204ENST00000395454 PPA1Q15181 289 aa12.96□□□□□ -0.33
SCAF11-204ENST00000395454 TIMM23BQ5SRD1 257 aa12.96□□□□□ -0.33
SCAF11-204ENST00000395454 ZNF626Q68DY1 528 aa12.96□□□□□ -0.33
SCAF11-204ENST00000395454 Q8NFD4 153 aa12.96□□□□□ -0.33
SCAF11-204ENST00000395454 DVL3Q92997 716 aaPredicted RBP12.96□□□□□ -0.33
SCAF11-204ENST00000395454 BORCS8Q96FH0 119 aa12.96□□□□□ -0.33
SCAF11-204ENST00000395454 DMRTB1Q96MA1 342 aa12.96□□□□□ -0.33
SCAF11-204ENST00000395454 GINS4Q9BRT9 223 aa12.96□□□□□ -0.33
SCAF11-204ENST00000395454 TINAGL1Q9GZM7 467 aaPredicted RBP12.96□□□□□ -0.33
SCAF11-204ENST00000395454 MEIKINA0A087WXM9 373 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 ZNF14P17017 642 aaPredicted RBP12.96□□□□□ -0.34
SCAF11-204ENST00000395454 ERP29P30040 261 aaKnown RBP12.96□□□□□ -0.34
SCAF11-204ENST00000395454 RAD52P43351 418 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 CBX5P45973 191 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 MALLQ13021 153 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 DMRTC1Q5HYR2 192 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 RTN4RL2Q86UN3 420 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 ZSCAN4Q8NAM6 433 aaPredicted RBP12.96□□□□□ -0.34
SCAF11-204ENST00000395454 CSNK2A3Q8NEV1 391 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 MUCL1Q96DR8 90 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 MRPS24Q96EL2 167 aaKnown RBP12.96□□□□□ -0.34
SCAF11-204ENST00000395454 ARHGAP5-AS1Q96IT6 56 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 S100A13Q99584 98 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 ING4Q9UNL4 249 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 SLC7A11Q9UPY5 501 aa12.96□□□□□ -0.34
SCAF11-204ENST00000395454 ANXA3P12429 323 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 CXCL3P19876 107 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 WNT5AP41221 380 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 SORDQ00796 357 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 C22orf34Q6ZV56 151 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 MDP1Q86V88 176 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 SPICQ8N5J4 248 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 WDR31Q8NA23 367 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 OR56B2PQ8NGI1 322 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 OR8S1Q8NH09 359 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 SNAPC3Q92966 411 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 MS4A3Q96HJ5 214 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 PRRT1Q99946 306 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 METTL9Q9H1A3 318 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 PTTG3PQ9NZH4 202 aa12.95□□□□□ -0.34
SCAF11-204ENST00000395454 PQLC2LA1A4F0 135 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 TUBAL3A6NHL2 446 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 AMY2AP04746 511 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 TMEM225BP0DP42 221 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 VSIG10L2P0DP72 767 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 ANXA7P20073 488 aaKnown RBP12.94□□□□□ -0.34
SCAF11-204ENST00000395454 SERPINA2P20848 420 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 APLNRP35414 380 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 ATP1B3P54709 279 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 GNG2P59768 71 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 ACTBL2Q562R1 376 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 RNASE10Q5GAN6 216 aaKnown RBP12.94□□□□□ -0.34
SCAF11-204ENST00000395454 VAX1Q5SQQ9 334 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 BEST4Q8NFU0 473 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 OR51T1Q8NGJ9 327 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 USB1Q9BQ65 265 aaKnown RBP12.94□□□□□ -0.34
SCAF11-204ENST00000395454 C1QTNF6Q9BXI9 259 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 GPN1Q9HCN4 374 aaPredicted RBP12.94□□□□□ -0.34
SCAF11-204ENST00000395454 NDRG3Q9UGV2 375 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 SCP2D1Q9UJQ7 156 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 HSF4Q9ULV5 492 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 CRYBG3Q68DQ2 2970 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 IGKV1-12A0A0C4DH73 117 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 CLEC18AA5D8T8 446 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 C19orf84I3L1E1 186 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 M0QYG6 137 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 NGFP01138 241 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 IGKV1D-12P01611 117 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 CCL2P13500 99 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 PRSS12P56730 875 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 PDZK1IP1Q13113 114 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 PLCXD3Q63HM9 321 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 CLEC18BQ6UXF7 455 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 IDO2Q6ZQW0 420 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 MRPL21Q7Z2W9 205 aaKnown RBP12.94□□□□□ -0.34
SCAF11-204ENST00000395454 FTMTQ8N4E7 242 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 BPIFB2Q8N4F0 458 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms