RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CXorf1O96002 111 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 FABP4P15090 132 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 MPGP29372 298 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 OR2Y1Q8NGV0 311 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 BEX2Q9BXY8 128 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 SLC24A4Q8NFF2 622 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 PIPOXQ9P0Z9 390 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 LAMTOR5O43504 91 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 MOB3AQ96BX8 217 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 P4HTMQ9NXG6 502 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 RHBDD3Q9Y3P4 386 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 SMUG1Q53HV7 270 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 SEC22AQ96IW7 307 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 PRSS50Q9UI38 385 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 A0A1B0GTL3 188 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 MEIS3P2A8K0S8 358 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 UPK3AO75631 287 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 BPIFB3P59826 476 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 PHYHD1Q5SRE7 291 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 GTF2H5Q6ZYL4 71 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 RXFP4Q8TDU9 374 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 MIR1-1HGQ9H1L0 117 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM38BQ9NVV0 291 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 GNB2P62879 340 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 FHL5Q5TD97 284 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 CISD1Q9NZ45 108 aaKnown RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 CLEC18AA5D8T8 446 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 A8MWL6 223 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 ITGB1BP1O14713 200 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 ANKRD55Q3KP44 614 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 C3orf36Q3SXR2 165 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 KIRREL2Q6UWL6 708 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 LINC01555Q8NAE3 123 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 CLEC18CQ8NCF0 446 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 DOK5Q9P104 306 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 DLG5Q8TDM6 1919 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 IGKV3-11P04433 115 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 F13BP05160 661 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 SUMO1P63165 101 aaKnown RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 OR52L2PQ8NGH6 319 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM45BQ96B21 275 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 LOXHD1Q8IVV2 1947 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 A0A1B0GVT2 93 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 RUNX2Q13950 521 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF385BQ569K4 471 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 ZFP82Q8N141 532 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 PPM1DO15297 605 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 YY2O15391 372 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 KRTDAPP60985 99 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 LINC00303Q3SY05 128 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 ASCL4Q6XD76 172 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 OR4D5Q8NGN0 318 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 HIST1H1EP10412 219 aaKnown RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 PVRP15151 417 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 SLC23A2Q9UGH3 650 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 AHRRA9YTQ3 701 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 CDC14BO60729 498 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 PPBPP02775 128 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 MRPL3P09001 348 aaKnown RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 IFITM2Q01629 132 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 OR4D6Q8NGJ1 314 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 OR51E1Q8TCB6 317 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 APOA2P02652 100 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 MLF2Q15773 248 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 HIKESHIQ53FT3 197 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 MRPL13Q9BYD1 178 aaKnown RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 MS4A5Q9H3V2 200 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 TRAV17A0A0B4J275 112 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM14DPA8MWL7 114 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 OR5H15A6NDH6 313 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 OR5H1A6NKK0 313 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 VN1R4Q7Z5H5 301 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 ISG20L2Q9H9L3 353 aaKnown RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SFTA3P0C7M3 94 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 GATAD1Q8WUU5 269 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 ISLRO14498 428 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 BRS3P32247 399 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 MYBPHQ13203 477 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 C2orf73Q8N5S3 287 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 MBD3L1Q8WWY6 194 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 MR1Q95460 341 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CDC42EP2O14613 210 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 NHLH2Q02577 135 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 IL17FQ96PD4 163 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SLX1AQ9BQ83 275 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CT45A10P0DMU9 189 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF674Q2M3X9 581 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 ASTLQ6HA08 431 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SH3BGRL3Q9H299 93 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 ACKR3P25106 362 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SSTR2P30874 369 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF705AQ6ZN79 300 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 BAGE3Q86Y29 109 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 BAGE2Q86Y30 109 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 KCNK17Q96T54 332 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 RHNO1Q9BSD3 238 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SOX7Q9BT81 388 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 LRFN3Q9BTN0 628 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 COL18A1P39060 1754 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 RPL36A-HNRNPH2H7BZ11 118 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms