RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FAM90A5PA8MXJ8 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A23PA8MXZ1 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A15PP0C7V4 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A13PP0C7W8 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A14PP0C7W9 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A24PP0C7X0 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 DUX4L2P0CJ85 424 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 DUX4L3P0CJ86 424 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 DUX4L4P0CJ87 422 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 DUX4L5P0CJ88 424 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 DUX4L6P0CJ89 424 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 DUX4L7P0CJ90 424 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 CALCRP30988 508 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 RFC3P40938 356 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 ARG2P78540 354 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 ZNF92Q03936 586 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 NHLRC3Q5JS37 347 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 PLCXD3Q63HM9 321 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 THOC7Q6I9Y2 204 aaKnown RBP12.15□□□□□ -0.46
USF1-202ENST00000368020 C11orf87Q6NUJ2 197 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 C17orf107Q6ZR85 190 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 OVCH2Q7RTZ1 564 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 OR10K1Q8NGX5 313 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 ANGPTL6Q8NI99 470 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FNDC9Q8TBE3 224 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 SCARB1Q8WTV0 552 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 NANOS1Q8WY41 292 aaKnown RBP12.15□□□□□ -0.46
USF1-202ENST00000368020 LDAHQ9H6V9 325 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 CALHM2Q9HA72 323 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 DUX4Q9UBX2 424 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 ZNF175Q9Y473 711 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 KCNMB2Q9Y691 235 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 TPRP12270 2363 aaKnown RBP12.15□□□□□ -0.47
USF1-202ENST00000368020 FIGNL2A6NMB9 653 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 DBX1A6NMT0 343 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 LEUTXA8MZ59 168 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 CEACAM4O75871 244 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 GABRR1P24046 479 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 ARPC4P59998 168 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 UBA52P62987 128 aaKnown RBP12.14□□□□□ -0.47
USF1-202ENST00000368020 PDZK1IP1Q13113 114 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 C1QTNF12Q5T7M4 302 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 SAXO1Q8IYX7 474 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 OSR2Q8N2R0 312 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 THAP6Q8TBB0 222 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 NMES1Q9C002 83 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 RAB18Q9NP72 206 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 ZNF701Q9NV72 531 aaPredicted RBP12.14□□□□□ -0.47
USF1-202ENST00000368020 C14orf166Q9Y224 244 aaKnown RBP12.14□□□□□ -0.47
USF1-202ENST00000368020 OSGIN2Q9Y236 505 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 ARHGAP21Q5T5U3 1957 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 DMXL2Q8TDJ6 3036 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 RPS10-NUDT3A0A1W2PQS6 291 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 SFT2D2O95562 160 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 PATE4P0C8F1 98 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 EDN3P14138 238 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 DEFB109BQ30KR1 87 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 ZNF766Q5HY98 468 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 RPUSD3Q6P087 351 aaKnown RBP12.14□□□□□ -0.47
USF1-202ENST00000368020 FGFBP3Q8TAT2 258 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 WDR89Q96FK6 387 aaPredicted RBP12.14□□□□□ -0.47
USF1-202ENST00000368020 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
USF1-202ENST00000368020 C5orf66Q9H5L9 145 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 GLRX2Q9NS18 164 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 MED9Q9NWA0 146 aa12.14□□□□□ -0.47
USF1-202ENST00000368020 TNRC6AQ8NDV7 1962 aaKnown RBP12.13□□□□□ -0.47
USF1-202ENST00000368020 FRYQ5TBA9 3013 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 CELSR3Q9NYQ7 3312 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 TRAV14DV4A0A0A6YYC5 116 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 TRGV5A0A0B4J1U4 118 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 KANTRA0A1W2PQU2 76 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 J3QW42 95 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 K7ENP7 123 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 INO80CQ6PI98 192 aaPredicted RBP12.13□□□□□ -0.47
USF1-202ENST00000368020 UNQ6494/PRO21346Q6UXR6 183 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 MOB3CQ70IA8 216 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 MRPL21Q7Z2W9 205 aaKnown RBP12.13□□□□□ -0.47
USF1-202ENST00000368020 ADAD2Q8NCV1 583 aaKnown RBP12.13□□□□□ -0.47
USF1-202ENST00000368020 CPEB3Q8NE35 698 aaKnown RBP12.13□□□□□ -0.47
USF1-202ENST00000368020 CASTOR1Q8WTX7 329 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 PPP1R1CQ8WVI7 109 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 VRK1Q99986 396 aaPredicted RBP12.13□□□□□ -0.47
USF1-202ENST00000368020 ZNF552Q9H707 407 aaPredicted RBP12.13□□□□□ -0.47
USF1-202ENST00000368020 ZDHHC11Q9H8X9 412 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 FN3KRPQ9HA64 309 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 NECAP2Q9NVZ3 263 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 ANXA10Q9UJ72 324 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 TNFSF18Q9UNG2 199 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 RTTNQ86VV8 2226 aa12.13□□□□□ -0.47
USF1-202ENST00000368020 IGKV1-27A0A075B6S5 117 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 TMEM8BA6NDV4 472 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 CST4P01036 141 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 IGHV3-9P01782 118 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 PET100P0DJ07 73 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 RRASP10301 218 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 CHATP28329 748 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 MPGP29372 298 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 NPY4RP50391 375 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 NKAPLQ5M9Q1 402 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 ACOT7LQ6ZUV0 252 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms