RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SLC25A22Q9H936 323 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 GPR34Q9UPC5 381 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 HIVEP2P31629 2446 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 PRAMEF26H0Y7S4 382 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 SMPD2O60906 423 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 KLRK1P26718 216 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 SEMG2Q02383 582 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 SKP2Q13309 424 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 IL13RA2Q14627 380 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 CALHM3Q86XJ0 350 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 MUC20Q8N307 709 aaPredicted RBP5.57□□□□□ -1.52
VCAN-203ENST00000343200 MARCH1Q8TCQ1 289 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 PERPQ96FX8 193 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 ST6GAL2Q96JF0 529 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 F2RL3Q96RI0 385 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 RBKSQ9H477 322 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 SLAMF8Q9P0V8 285 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 CBLCQ9ULV8 474 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 HS3ST3A1Q9Y663 406 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 CD52P31358 61 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 RIPPLY3P57055 190 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 SOX4Q06945 474 aaPredicted RBP5.57□□□□□ -1.52
VCAN-203ENST00000343200 ZNF273Q14593 569 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 LINC00303Q3SY05 128 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 OR4F17Q8NGA8 305 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 CHODLQ9H9P2 273 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 SLC7A10Q9NS82 523 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 LOC107986453A0A1B0GWG9 222 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 J3KTA2 159 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 LINC00614P0C842 121 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 LAG3P18627 525 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 ATF1P18846 271 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 SCAND1P57086 179 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 CD300CQ08708 224 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 LDLRAD2Q5SZI1 272 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FAM71F2Q6NXP2 309 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 CPEB3Q8NE35 698 aaKnown RBP5.57□□□□□ -1.52
VCAN-203ENST00000343200 TMEM140Q9NV12 185 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 ZDHHC8Q9ULC8 765 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 CAMTA1Q9Y6Y1 1673 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FRS3O43559 492 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FGF2P09038 288 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FCRL6Q6DN72 434 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 CYB561D1Q8N8Q1 229 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 DNAJC4Q9NNZ3 241 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FTSJ1Q9UET6 329 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 OR51B4Q9Y5P0 310 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 GPX5O75715 221 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 ERGP11308 486 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FKBP1AP62942 108 aaKnown RBP5.57□□□□□ -1.52
VCAN-203ENST00000343200 TNFRSF9Q07011 255 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 OR10AD1Q8NGE0 317 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 RAB33BQ9H082 229 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FIGNL2A6NMB9 653 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 ZNF716A6NP11 495 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 C17orf105B2RV13 164 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 CDX4O14627 284 aaPredicted RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 RNASE1P07998 156 aaKnown RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 KLF3P57682 345 aaPredicted RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 MPV17LQ2QL34 196 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 TREML2Q5T2D2 321 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 TRAT1Q6PIZ9 186 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 RPS4Y2Q8TD47 263 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 MS4A7Q9GZW8 240 aaPredicted RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 C20orf141Q9NUB4 165 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 CACNG5Q9UF02 275 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 ADAMTS5Q9UNA0 930 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 RAXQ9Y2V3 346 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 TNRC6BQ9UPQ9 1833 aaKnown RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 CD14P08571 375 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 TEAD1P28347 426 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 ADCYAP1R1P41586 468 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 CTAG1AP78358 180 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 SLC38A11Q08AI6 406 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 IL10RAQ13651 578 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 MRGPRGQ86SM5 289 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 SIRT6Q8N6T7 355 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 ASCL3Q9NQ33 180 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 MRPS17Q9Y2R5 130 aaKnown RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 TRBV11-1A0A0K0K1C0 115 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 MBLAC1A4D2B0 266 aaPredicted RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 RBFOX2O43251 390 aaKnown RBP eCLIP5.56□□□□□ -1.52
VCAN-203ENST00000343200 CST7O76096 145 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 GABRA1P14867 456 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 RNFT1Q5M7Z0 435 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 ZNF519Q8TB69 540 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 NEUROG1Q92886 237 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 ALG14Q96F25 216 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 TMEM167BQ9NRX6 74 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 SNURFLB1AK76 121 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 PPIAP62937 165 aaKnown RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 IZUMO4Q1ZYL8 232 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 ZC3HAV1LQ96H79 300 aaKnown RBP5.56□□□□□ -1.52
VCAN-203ENST00000343200 PRRX2Q99811 253 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 TMEM147Q9BVK8 224 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 TXNIPQ9H3M7 391 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 HSF4Q9ULV5 492 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 SLC5A6Q9Y289 635 aa5.56□□□□□ -1.52
VCAN-203ENST00000343200 SPATA31A1Q5TZJ5 1347 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms