RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 Q6ZSR3 168 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 SLC16A9Q7RTY1 509 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 RHBDD1Q8TEB9 315 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 YPEL2Q96QA6 119 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 ATP6V0BQ99437 205 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 RRAGCQ9HB90 399 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 GPR27Q9NS67 375 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 ELOVL5Q9NYP7 299 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 HIF3AQ9Y2N7 669 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 MED31Q9Y3C7 131 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 TRAV18A0A075B6X5 111 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 A0A1B0GV50 99 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 A0A1W2PNV4 684 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 RBFOX3A6NFN3 312 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 OR5B21A6NL26 309 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 PROB1E7EW31 1015 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 GNG7O60262 68 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 RAMP3O60896 148 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 PRH1P02810 166 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 CKMP06732 381 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 MRPL3P09001 348 aaKnown RBP5.85□□□□□ -1.47
ZNF540-201ENST00000316433 SEC11BP0C7V7 166 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 PTNP21246 168 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 PEBP1P30086 187 aaKnown RBP5.85□□□□□ -1.47
ZNF540-201ENST00000316433 BUD31P41223 144 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-201ENST00000316433 GPR1P46091 355 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 HLA-DRB3P79483 266 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 PRDX4Q13162 271 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 ELOCQ15369 112 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 PCK2Q16822 640 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM144Q7Z5S9 345 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 ST6GALNAC3Q8NDV1 305 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 FAM3CQ92520 227 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 PELI1Q96FA3 418 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 MED20Q9H944 212 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF581Q9P0T4 197 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 FBXL17Q9UF56 701 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF780BQ9Y6R6 833 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 TRAV26-1A0A087WT03 109 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 A0A1B0GU03 582 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 C4orf47A7E2U8 309 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 CDC42EP2O14613 210 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 CDIPTO14735 213 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 MTX2O75431 263 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 ISG15P05161 165 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 CRYGCP07315 174 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 CTSDP07339 412 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-201ENST00000316433 CHRM2P08172 466 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 ADH5P11766 374 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 HNRNPA3P51991 378 aaKnown RBP5.85□□□□□ -1.47
ZNF540-201ENST00000316433 GNB2P62879 340 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 DMWDQ09019 674 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 LASP1Q14847 261 aaKnown RBP5.85□□□□□ -1.47
ZNF540-201ENST00000316433 OR1Q1Q15612 314 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 C5orf64Q2M2E5 130 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 LINC01590Q5TEZ4 76 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF880Q6PDB4 577 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 FAM180AQ6UWF9 173 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 NIT1Q86X76 327 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 CDC20BQ86Y33 519 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 ZDHHC22Q8N966 263 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 OR52L2PQ8NGH6 319 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 OR5AR1Q8NGP9 310 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 OR6K2Q8NGY2 324 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF417Q8TAU3 575 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 ZFYVE21Q9BQ24 234 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 CCDC3Q9BQI4 270 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 NICN1Q9BSH3 213 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM9BQ9NQ34 198 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 P4HTMQ9NXG6 502 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 BET1LQ9NYM9 111 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 UQCR10Q9UDW1 63 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 TAC3Q9UHF0 121 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 SLC13A4Q9UKG4 626 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 RHBDD3Q9Y3P4 386 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 TRBV2A0A0J9YWF9 115 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM212A6NML5 194 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 C4orf51C9J302 202 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 NDUFB2O95178 105 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 TACSTD2P09758 323 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 CPMP14384 443 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 SSR2P43308 183 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 BTN3A2P78410 334 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 EIF2B1Q14232 305 aaKnown RBP5.85□□□□□ -1.47
ZNF540-201ENST00000316433 NSDHLQ15738 373 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 PRICKLE4Q2TBC4 344 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 BSXQ3C1V8 233 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 TP53I3Q53FA7 332 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 OR4A47Q6IF82 309 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 IGF2-ASQ6U949 168 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 THSD4Q6ZMP0 1018 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 FAM220AQ7Z4H9 259 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 LILRA3Q8N6C8 439 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF740Q8NDX6 193 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 OR10S1Q8NGN2 331 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 IL22RA2Q969J5 263 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM106BQ9NUM4 274 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 MRPL22Q9NWU5 206 aaKnown RBP5.85□□□□□ -1.47
ZNF540-201ENST00000316433 RNF186Q9NXI6 227 aa5.85□□□□□ -1.47
ZNF540-201ENST00000316433 C2orf16Q68DN1 1984 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms