RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 TMEM234Q8WY98 164 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 HIST1H2BHQ93079 126 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 HIST1H2BNQ99877 126 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 HIST1H2BMQ99879 126 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 SUCNR1Q9BXA5 334 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 SERINC1Q9NRX5 453 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 ZNF581Q9P0T4 197 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 DOCK8Q8NF50 2099 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 CTSDP07339 412 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-202ENST00000310645 THEGLP0DJG4 465 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 NDUFB7P17568 137 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 RABIFP47224 123 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 KHDC3LQ587J8 217 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 C1QL4Q86Z23 238 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 STRAPQ9Y3F4 350 aaKnown RBP12.87□□□□□ -0.35
COL6A2-202ENST00000310645 NCOA6Q14686 2063 aaPredicted RBP12.86□□□□□ -0.35
COL6A2-202ENST00000310645 ANGPTL7O43827 346 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 QDPRP09417 244 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 ZNF728P0DKX0 622 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 MDKP21741 143 aaPredicted RBP12.86□□□□□ -0.35
COL6A2-202ENST00000310645 RND3P61587 244 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 YPEL5P62699 121 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 TAF9Q16594 264 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 Q3ZCU0 254 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 ZNF429Q86V71 674 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 BADQ92934 168 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 ZDHHC12Q96GR4 267 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 CUTCQ9NTM9 273 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 OBP2AQ9NY56 170 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 ZNF587BE7ETH6 402 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 ST8SIA3O43173 380 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 ONECUT2O95948 504 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 TNFRSF4P43489 277 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 ELOBQ15370 118 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 LANCL3Q6ZV70 420 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 LILRB2Q8N423 598 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 OR11L1Q8NGX0 322 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 GABRG3Q99928 467 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 ARV1Q9H2C2 271 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 SLCO1B1Q9Y6L6 691 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 LAMA1P25391 3075 aa12.86□□□□□ -0.35
COL6A2-202ENST00000310645 A0A087X0M5 115 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 A0A1B0GX30 115 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 NXPH3O95157 252 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 RBP2P50120 134 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 UCP2P55851 309 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 FOXF1Q12946 379 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 UBE2V2Q15819 145 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 FAM189A2Q15884 450 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 C17orf78Q8N4C9 275 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 CYB561D1Q8N8Q1 229 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 MAGT1Q9H0U3 335 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 SMOC1Q9H4F8 434 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 A0A1W2PNR3 127 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 HIST1H1BP16401 226 aaKnown RBP12.85□□□□□ -0.35
COL6A2-202ENST00000310645 USF2Q15853 346 aaPredicted RBP12.85□□□□□ -0.35
COL6A2-202ENST00000310645 TMEM92Q6UXU6 159 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 GTF3AQ92664 365 aaKnown RBP12.85□□□□□ -0.35
COL6A2-202ENST00000310645 FAM131CQ96AQ9 280 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 PPP4R1LQ9P1A2 415 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 AK3Q9UIJ7 227 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 TMEM131Q92545 1883 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 A0A1W2PQD3 144 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 ZNF724A8MTY0 619 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 SERPINE3A8MV23 424 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 SEC14L6B5MCN3 397 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 PHF1O43189 567 aaPredicted RBP12.85□□□□□ -0.35
COL6A2-202ENST00000310645 TNFSF12O43508 249 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 ATP6V0CP27449 155 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 GNMTQ14749 295 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 FAM89BQ8N5H3 189 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 TMEM217Q8N7C4 229 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 SLC38A9Q8NBW4 561 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 CRLF2Q9HC73 371 aa12.85□□□□□ -0.35
COL6A2-202ENST00000310645 TCRBV21S2A2A0A5A6 115 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 ADAM10O14672 748 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 SEMA4FO95754 770 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 PDCD1Q15116 288 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 TMEM176BQ3YBM2 270 aaPredicted RBP12.84□□□□□ -0.35
COL6A2-202ENST00000310645 DOK3Q7L591 496 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 GALNT14Q96FL9 552 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 ANXA10Q9UJ72 324 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 SLC7A11Q9UPY5 501 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 RALGAPA1Q6GYQ0 2036 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 CPAMD8Q8IZJ3 1885 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 ST8SIA5O15466 376 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 DCAF7P61962 342 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 COL19A1Q14993 1142 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 UEVLDQ8IX04 471 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 LFNGQ8NES3 379 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 HPSE2Q8WWQ2 592 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 YPEL4Q96NS1 127 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 NAA60Q9H7X0 242 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 CYP8B1Q9UNU6 501 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 VSTM2BA6NLU5 285 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 K7N7A8 449 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 CST7O76096 145 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 DDTP30046 118 aa12.84□□□□□ -0.35
COL6A2-202ENST00000310645 FZD2Q14332 565 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms