RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZNF574Q6ZN55 896 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-201ENST00000300527 BADQ92934 168 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 KCNK17Q96T54 332 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 OPA3Q9H6K4 179 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 LHFPL6Q9Y693 200 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 HIST1H2BKO60814 126 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 SCAF4O95104 1147 aaKnown RBP12.87□□□□□ -0.35
COL6A2-201ENST00000300527 DDAH2O95865 285 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 HIST1H2BJP06899 126 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 GUSBP08236 651 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 SEC11BP0C7V7 166 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 HIST1H2BOP23527 126 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 HIST1H2BBP33778 126 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 P2RY1P47900 373 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-201ENST00000300527 HIST1H2BDP58876 126 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 HIST1H2BCP62807 126 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 RAB1AP62820 205 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 HIST2H2BEQ16778 126 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-201ENST00000300527 STX12Q86Y82 276 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 HIST1H2BHQ93079 126 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 MUCL1Q96DR8 90 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 HIST1H2BNQ99877 126 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 HIST1H2BMQ99879 126 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 IL23AQ9NPF7 189 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 PPP4R1LQ9P1A2 415 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 LAMA1P25391 3075 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 TCRBV21S2A2A0A5A6 115 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 TSTD3H0UI37 97 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 GEMIN2O14893 280 aaKnown RBP12.86□□□□□ -0.35
COL6A2-201ENST00000300527 GPR137BO60478 399 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 RBP2P50120 134 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 SPIN3Q5JUX0 258 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 ARHGEF39Q8N4T4 335 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 RNASE11Q8TAA1 199 aaKnown RBP12.86□□□□□ -0.35
COL6A2-201ENST00000300527 ZNF721Q8TF20 911 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 WWTR1Q9GZV5 400 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 CHST11Q9NPF2 352 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 ST8SIA3O43173 380 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 RND3P61587 244 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 DEGS2Q6QHC5 323 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 HAS2Q92819 552 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 GPR173Q9NS66 373 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 CUTCQ9NTM9 273 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 SHANK1Q9Y566 2161 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 REV3LO60673 3130 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 A0A087WZY1 265 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 E9PLN8 166 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 NPIPB7O75200 414 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 UBE2V2Q15819 145 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 SHDQ96IW2 340 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 SERINC1Q9NRX5 453 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 KLRF1Q9NZS2 232 aa12.86□□□□□ -0.35
COL6A2-201ENST00000300527 SSSCA1O60232 199 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 ATP6V0CP27449 155 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 DDTP30046 118 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 RAB11AP62491 216 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 HSD11B2P80365 405 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 UEVLDQ8IX04 471 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 TMEM234Q8WY98 164 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 NIPSNAP3BQ9BS92 247 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 PRDM13Q9H4Q3 707 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 ZNF160Q9HCG1 818 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 HSF4Q9ULV5 492 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 UNC13CQ8NB66 2214 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 ZFP92A6NM28 416 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 H3BP45 60 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 G0S2P27469 103 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 SSTP61278 116 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 RPL23AP62750 156 aaKnown RBP12.85□□□□□ -0.35
COL6A2-201ENST00000300527 SLC38A9Q8NBW4 561 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 NECAP1Q8NC96 275 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 RLN3Q8WXF3 142 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 LURAP1Q96LR2 239 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 SCRT1Q9BWW7 348 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 LIME1Q9H400 295 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 WSB1Q9Y6I7 421 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 CEP290O15078 2479 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 TNFRSF10CO14798 259 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 ST8SIA5O15466 376 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 SNRPCP09234 159 aaKnown RBP12.85□□□□□ -0.35
COL6A2-201ENST00000300527 TRGC1P0CF51 173 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 VAMP2P63027 116 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 COMMD1Q8N668 190 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 GPBAR1Q8TDU6 330 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 TCTN2Q96GX1 697 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 IER2Q9BTL4 223 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 LANCL2Q9NS86 450 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 GNG13Q9P2W3 67 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 PIGLQ9Y2B2 252 aa12.85□□□□□ -0.35
COL6A2-201ENST00000300527 TRIOO75962 3097 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 CABIN1Q9Y6J0 2220 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 VSTM2BA6NLU5 285 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 SEC14L6B5MCN3 397 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 SEMA4FO95754 770 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 CA3P07451 260 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 IFI6P09912 130 aa12.84□□□□□ -0.35
COL6A2-201ENST00000300527 GUCA1AP43080 201 aaPredicted RBP12.84□□□□□ -0.35
COL6A2-201ENST00000300527 ELOBQ15370 118 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms