RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 AKR7A2O43488 359 aa15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 MRPS14O60783 128 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 GZMKP49863 264 aa15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 AGBL4Q5VU57 503 aa15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 LIPAP38571 399 aa15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 RPL29P47914 159 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 SMIM21Q3B7S5 101 aa15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 TOPAZ1Q8N9V7 1692 aa15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 OR52L2PQ8NGH6 319 aa15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 PACRGQ96M98 296 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 NEURL2Q9BR09 285 aa15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 MYOZ1Q9NP98 299 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 DIMT1Q9UNQ2 313 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-253ENST00000637927 ST8SIA3O43173 380 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 DLX1P56177 255 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 FOXF1Q12946 379 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 BEX4Q9NWD9 120 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 A0A0A6YYJ9 748 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 ROM1Q03395 351 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 LSRQ86X29 649 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 SP1P08047 785 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 RPL12P30050 165 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 RPS19P39019 145 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 LOXL3P58215 753 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 LRRC29Q8WV35 223 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 RAB1BQ9H0U4 201 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 SLC7A10Q9NS82 523 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 TRABD2BA6NFA1 517 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 PTHLHP12272 177 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 PPP1CBP62140 327 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 TWIST1Q15672 202 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 OSR2Q8N2R0 312 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 ANKRD53Q8N9V6 530 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 DRAXINQ8NBI3 349 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 KTI12Q96EK9 354 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 CORINQ9Y5Q5 1042 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 MDC1Q14676 2089 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 GSG1Q2KHT4 349 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 MRGPREQ86SM8 312 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 OR13C6PQ8NH95 151 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 TBX15Q96SF7 602 aa15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 NDRG4Q9ULP0 352 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-253ENST00000637927 FCMRO60667 390 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 MT-ATP6P00846 226 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 SRFP11831 508 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 GNG4P50150 75 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 AMMECR1LQ6DCA0 310 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 RAB37Q96AX2 223 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 PRNTQ86SH4 94 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 OR8G5Q8NG78 346 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 AUNIPQ9H7T9 357 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 GDF2Q9UK05 429 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 ENDOGQ14249 297 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 TM4SF19Q96DZ7 209 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 SLCO1C1Q9NYB5 712 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 TUBAL3A6NHL2 446 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 SPI1P17947 270 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 PMS2P11Q13670 270 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 ZNF793Q6ZN11 406 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 GRAMD2BQ96HH9 432 aa15.21■□□□□ 0.03
CACNA1A-253ENST00000637927 IGHV3-72A0A0B4J1Y9 119 aa15.21■□□□□ 0.02
CACNA1A-253ENST00000637927 SDHAP31040 664 aa15.21■□□□□ 0.02
CACNA1A-253ENST00000637927 CD276Q5ZPR3 534 aa15.21■□□□□ 0.02
CACNA1A-253ENST00000637927 C1QTNF3Q9BXJ4 246 aa15.21■□□□□ 0.02
CACNA1A-253ENST00000637927 ETV7Q9Y603 341 aa15.21■□□□□ 0.02
CACNA1A-253ENST00000637927 TOX3O15405 576 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 ACSM4P0C7M7 580 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 OR2L13Q8N349 312 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 NKAIN3Q8N8D7 197 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 GATA6Q92908 595 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 FBXL4Q9UKA2 621 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 IHHQ14623 411 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 RND1Q92730 232 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 PELI1Q96FA3 418 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 GLRX2Q9NS18 164 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 ADAM11O75078 769 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 LGALSLQ3ZCW2 172 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 B3GNTL1Q67FW5 361 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 SLC36A1Q7Z2H8 476 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 MOGAT1Q96PD6 335 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 COX5AP20674 150 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 SYT11Q9BT88 431 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 PGPEP1Q9NXJ5 209 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 LRRC37A3O60309 1634 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 IGKV3D-20A0A0C4DH25 116 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 SLC37A1P57057 533 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 SLC35D3Q5M8T2 416 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 CALHM3Q86XJ0 350 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 LRRC61Q9BV99 259 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 KCNMB2Q9Y691 235 aa15.2■□□□□ 0.02
CACNA1A-253ENST00000637927 KIR2DS1A0A191URI9 304 aa15.19■□□□□ 0.02
CACNA1A-253ENST00000637927 KIR2DS4P43632 304 aa15.19■□□□□ 0.02
CACNA1A-253ENST00000637927 KIR2DS1Q14954 304 aa15.19■□□□□ 0.02
CACNA1A-253ENST00000637927 RPP25Q9BUL9 199 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-253ENST00000637927 KCNK15Q9H427 330 aa15.19■□□□□ 0.02
CACNA1A-253ENST00000637927 CCL21O00585 134 aa15.19■□□□□ 0.02
CACNA1A-253ENST00000637927 HOXC11O43248 304 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-253ENST00000637927 GSTZ1O43708 216 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-253ENST00000637927 MELTFP08582 738 aa15.19■□□□□ 0.02
CACNA1A-253ENST00000637927 MRPL13Q9BYD1 178 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms