RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 PPP1R8Q12972 351 aaKnown RBP11□□□□□ -0.65
SNX1-214ENST00000625244 TSPAN31Q12999 210 aa11□□□□□ -0.65
SNX1-214ENST00000625244 C9orf66Q5T8R8 295 aa11□□□□□ -0.65
SNX1-214ENST00000625244 SMARCD3Q6STE5 483 aa11□□□□□ -0.65
SNX1-214ENST00000625244 PTCHD4Q6ZW05 846 aa11□□□□□ -0.65
SNX1-214ENST00000625244 AQP11Q8NBQ7 271 aa11□□□□□ -0.65
SNX1-214ENST00000625244 OR9Q2Q8NGE9 314 aa11□□□□□ -0.65
SNX1-214ENST00000625244 OR4C15Q8NGM1 316 aa11□□□□□ -0.65
SNX1-214ENST00000625244 VNN3Q9NY84 501 aa11□□□□□ -0.65
SNX1-214ENST00000625244 HILPDAQ9Y5L2 63 aa11□□□□□ -0.65
SNX1-214ENST00000625244 SORL1Q92673 2214 aa11□□□□□ -0.65
SNX1-214ENST00000625244 IGKV1D-17A0A075B6S4 117 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 ARRDC5A6NEK1 342 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 OR2AT4A6NND4 320 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 ANKRD30BLA7E2S9 258 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 AKR7A2O43488 359 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 FRMD6-AS1P0C7T7 363 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 SLC6A6P31641 620 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 ENTPD1P49961 510 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 RPS6KA3P51812 740 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 GP2P55259 537 aaKnown RBP10.99□□□□□ -0.65
SNX1-214ENST00000625244 SLC34A1Q06495 639 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 ATP6AP1Q15904 470 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 LHFPL2Q6ZUX7 228 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 KLHL30-AS1Q8NEE0 82 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 PYDC1Q8WXC3 89 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 RPL3LQ92901 407 aaKnown RBP10.99□□□□□ -0.65
SNX1-214ENST00000625244 NRBF2Q96F24 287 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 RAX2Q96IS3 184 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 NLKQ9UBE8 527 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 SIGLEC7Q9Y286 467 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 LRP12Q9Y561 859 aa10.99□□□□□ -0.65
SNX1-214ENST00000625244 IGLV1-36A0A0B4J1U3 117 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 PSMB11A5LHX3 300 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 SOCS2O14508 198 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 LY86O95711 162 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 AMY1AP04745 511 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 AMY2AP04746 511 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 ANXA8P13928 327 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 CD24P25063 80 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 NOS3P29474 1203 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 CDKN2AP42771 156 aaKnown RBP10.98□□□□□ -0.65
SNX1-214ENST00000625244 GSSP48637 474 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 VEGFCP49767 419 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 OR12D2P58182 307 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 RPL31P62899 125 aaKnown RBP10.98□□□□□ -0.65
SNX1-214ENST00000625244 ZNF626Q68DY1 528 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 GPR139Q6DWJ6 353 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 DPY19L2P2Q6ZN68 376 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 ZDHHC13Q8IUH4 622 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 SLC26A10Q8NG04 563 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 OR4M1Q8NGD0 313 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 OR10Z1Q8NGY1 313 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 DNAJC9Q8WXX5 260 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 DGCR6LQ9BY27 220 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 OR52D1Q9H346 318 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 USE1Q9NZ43 259 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 CYB5R1Q9UHQ9 305 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 ZNF222Q9UK12 451 aa10.98□□□□□ -0.65
SNX1-214ENST00000625244 hCG_1809904A0A1W2PP81 198 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 A0A1W2PPE2 198 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 A0A1W2PPH5 198 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 A0A1W2PR64 198 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 A0A1W2PRV1 198 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 SEC14L6B5MCN3 397 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 G3V2T6 193 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 CCL24O00175 119 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 GASTP01350 101 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 SLC2A1P11166 492 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 PSG2P11465 335 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 SLC6A1P30531 599 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 CAPZA1P52907 286 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 ZNF273Q14593 569 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 RASSF6Q6ZTQ3 369 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 C16orf82Q7Z2V1 217 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 OR6V1Q8N148 313 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 OR2AJ1Q8NGZ0 328 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 TEX47Q8TBZ9 253 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 SPTSSAQ969W0 71 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 CENPNQ96H22 339 aaPredicted RBP10.97□□□□□ -0.65
SNX1-214ENST00000625244 FEVQ99581 238 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 IFT27Q9BW83 186 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 TEX12Q9BXU0 123 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 LIN7BQ9HAP6 207 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 TBC1D23Q9NUY8 699 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 B9D1Q9UPM9 204 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 N6AMT1Q9Y5N5 214 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 CDH10Q9Y6N8 788 aa10.97□□□□□ -0.65
SNX1-214ENST00000625244 H3BN98 237 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 H3BUI4 141 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 PTP4A3O75365 173 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 GNALP38405 381 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 DDOSTP39656 456 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 DLX6P56179 175 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 ZNF770Q6IQ21 691 aaPredicted RBP10.96□□□□□ -0.65
SNX1-214ENST00000625244 AMIGO2Q86SJ2 522 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 ADCK1Q86TW2 530 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 EGFL6Q8IUX8 553 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 CYB561A3Q8NBI2 242 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 OR11H6Q8NGC7 330 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms