RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ADAD2Q8NCV1 583 aaKnown RBP17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 CITED4Q96RK1 184 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 KCNN3Q9UGI6 736 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 SLC7A11Q9UPY5 501 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 HLA-GP17693 338 aa17.08■□□□□ 0.32
PCDHB11-202ENST00000624887 TNFSF10P50591 281 aa17.08■□□□□ 0.32
PCDHB11-202ENST00000624887 ATP1B3P54709 279 aa17.08■□□□□ 0.32
PCDHB11-202ENST00000624887 TAS2R31P59538 309 aa17.08■□□□□ 0.32
PCDHB11-202ENST00000624887 C6orf201Q7Z4U5 140 aa17.08■□□□□ 0.32
PCDHB11-202ENST00000624887 PLEKHJ1Q9NW61 149 aa17.08■□□□□ 0.32
PCDHB11-202ENST00000624887 SPRR3Q9UBC9 169 aa17.08■□□□□ 0.32
PCDHB11-202ENST00000624887 ZNF503-AS2A6NEH8 195 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 NKX2-8O15522 239 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 PLATP00750 562 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 NOVA1P51513 510 aaKnown RBP17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 EXOSC2Q13868 293 aaKnown RBP17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 LIN54Q6MZP7 749 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 MOB3CQ70IA8 216 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 ASCL5Q7RTU5 278 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 CSNK2A3Q8NEV1 391 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 PXT1Q8NFP0 134 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 PIGCQ92535 297 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 PHB2Q99623 299 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 IL36GQ9NZH8 169 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 ZNF230Q9UIE0 474 aaPredicted RBP17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 GPR132Q9UNW8 380 aa17.07■□□□□ 0.32
PCDHB11-202ENST00000624887 FXYD6-FXYD2A0A087WZ82 144 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 ZSCAN5BA6NJL1 495 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 FIGNL2A6NMB9 653 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 ARPC5O15511 151 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 CD8AP01732 235 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 SERPINA5P05154 406 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 AKR1C4P17516 323 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 ARR3P36575 388 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 OR3A2P47893 321 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 PLCXD3Q63HM9 321 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 TMPRSS7Q7RTY8 843 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 LHFPL1Q86WI0 220 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 TMEM17Q86X19 198 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 OR8H3Q8N146 312 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 REPIN1Q9BWE0 567 aaKnown RBP17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 FXYD6Q9H0Q3 95 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 NUP50Q9UKX7 468 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 HSF4Q9ULV5 492 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 ARHGAP21Q5T5U3 1957 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 C5orf49A4QMS7 147 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 RFPL4AA6NLU0 287 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 RFPL4AL1F8VTS6 287 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 DUS4LO95620 317 aaKnown RBP17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 CFDP00746 253 aaPredicted RBP17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 CD79AP11912 226 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 PPP3CBP16298 524 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 PDZK1IP1Q13113 114 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 OR5AP2Q8NGF4 316 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 EMG1Q92979 244 aaKnown RBP17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 UBQLN2Q9UHD9 624 aa17.06■□□□□ 0.32
PCDHB11-202ENST00000624887 IGKV1-12A0A0C4DH73 117 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 IGKV1D-12P01611 117 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 CCNOP22674 350 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 VAMP1P23763 118 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 S100A11P31949 105 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 RAB1AP62820 205 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 SORDQ00796 357 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 SRSF6Q13247 344 aaKnown RBP17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 TAF9Q16594 264 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 NKAPLQ5M9Q1 402 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 RPUSD3Q6P087 351 aaKnown RBP17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 PEG10Q86TG7 708 aaKnown RBP17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 TMEM185AQ8NFB2 350 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 MRPS24Q96EL2 167 aaKnown RBP17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 SCGB3A2Q96PL1 93 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 C5orf66Q9H5L9 145 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 GP6Q9HCN6 339 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 MAB21L2Q9Y586 359 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 CSAG2Q9Y5P2 127 aa17.05■□□□□ 0.32
PCDHB11-202ENST00000624887 TRAV14DV4A0A0A6YYC5 116 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 SLC22A20A6NK97 555 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 FPR2P25090 351 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 AGTR1P30556 359 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 NPY4RP50391 375 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 FGL1Q08830 312 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 TMEM128Q5BJH2 165 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 IGF2-ASQ6U949 168 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 OVCH2Q7RTZ1 564 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 OR13G1Q8NGZ3 307 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 MAFIPQ8WZ33 124 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 APOBEC3DQ96AK3 386 aaPredicted RBP17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 ZNF701Q9NV72 531 aaPredicted RBP17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 PRSS50Q9UI38 385 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 OSGIN2Q9Y236 505 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 CELSR3Q9NYQ7 3312 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 CCL2P13500 99 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 CHRFAM7AQ494W8 412 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 AADACL3Q5VUY0 350 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 TMUB2Q71RG4 321 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 POM121L2Q96KW2 1035 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 PPA2Q9H2U2 334 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 EHFQ9NZC4 300 aa17.04■□□□□ 0.32
PCDHB11-202ENST00000624887 OR5H14A6NHG9 310 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 ZNF850A8MQ14 1090 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms