RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	COX14	Q96I36	57 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	SMIM7	Q9BQ49	75 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	SLC25A31	Q9H0C2	315 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	PLK3	Q9H4B4	646 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	TUBA4B	Q9H853	241 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	KNTC1	P50748	2209 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	DBX1	A6NMT0	343 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	HSPB6	O14558	160 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	CDC14B	O60729	498 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	HLA-DOB	P13765	273 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	FCAR	P24071	287 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	PPP1CA	P62136	330 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	M1AP	Q8TC57	530 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	RSPRY1	Q96DX4	576 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	ZNF160	Q9HCG1	818 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	MBP	P02686	304 aa	Predicted RBP	13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	RPS4Y1	P22090	263 aa	Known RBP	13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	TOMM20L	Q6UXN7	152 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	NPSR1	Q6W5P4	371 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	SAMD10	Q9BYL1	202 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	RNF208	Q9H0X6	261 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	IGKV1D-42	A0A075B6H8	117 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179		A6NNC1	897 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	HBE1	P02100	147 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	PTGER4	P35408	488 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	MTCP1	P56278	107 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	ERVFRD-1	P60508	538 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	TMEM41B	Q5BJD5	291 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	TMEM230	Q96A57	120 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	RBMXL1	Q96E39	390 aa	Known RBP	13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	PITPNC1	Q9UKF7	332 aa		13.85	□□□□□ -0.19
SYNRG-223	ENST00000616179	HCRTR1	O43613	425 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	DEDD	O75618	318 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	TRAPPC6A	O75865	159 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	CSF2RA	P15509	400 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	GABRA4	P48169	554 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	INSM1	Q01101	510 aa	Predicted RBP	13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	ZNF77	Q15935	545 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	S1PR5	Q9H228	398 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	TXNIP	Q9H3M7	391 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	MSL2	Q9HCI7	577 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	HS3ST3B1	Q9Y662	390 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179		H0YIG0	161 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	HLA-G	P17693	338 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	P2RY1	P47900	373 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	CLN3	Q13286	438 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	DMRTA1	Q5VZB9	504 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	HIST3H2BB	Q8N257	126 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	ZNF775	Q96BV0	537 aa	Predicted RBP	13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	ZNF684	Q5T5D7	378 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	ZNF776	Q68DI1	518 aa	Predicted RBP	13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	ZNF787	Q6DD87	383 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	ATG4D	Q86TL0	474 aa	Predicted RBP	13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	LRRC18	Q8N456	261 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	LIN37	Q96GY3	246 aa	Predicted RBP	13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	GDE1	Q9NZC3	331 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	FUT9	Q9Y231	359 aa		13.84	□□□□□ -0.19
SYNRG-223	ENST00000616179	IFNA1	P01562	189 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	IQCJ	Q1A5X6	159 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	UEVLD	Q8IX04	471 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	SLC26A10	Q8NG04	563 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	PRDM13	Q9H4Q3	707 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	SUSD2	Q9UGT4	822 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF107	Q9UII5	783 aa	Predicted RBP	13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	NSDHL	Q15738	373 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	PCK2	Q16822	640 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR2C3	Q8N628	320 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	ANKRD9	Q96BM1	317 aa	Predicted RBP	13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	MUCL1	Q96DR8	90 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	GALNT14	Q96FL9	552 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	TRPM7	Q96QT4	1865 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	FAAP24	Q9BTP7	215 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	MENT	Q9BUN1	341 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	LPAR5	Q9H1C0	372 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	CERS4	Q9HA82	394 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	KLRF1	Q9NZS2	232 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	EREG	O14944	169 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	GAPDH	P04406	335 aa	Known RBP	13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	MELTF	P08582	738 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	RPP30	P78346	268 aa	Known RBP	13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	ELOB	Q15370	118 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	SFTPA2	Q8IWL1	248 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	CCDC71L	Q8N9Z2	235 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	C11orf40	Q8WZ69	217 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	HIST1H2AA	Q96QV6	131 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	SOX7	Q9BT81	388 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	UCK1	Q9HA47	277 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	PARD6A	Q9NPB6	346 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	HDGFL3	Q9Y3E1	203 aa		13.83	□□□□□ -0.2
SYNRG-223	ENST00000616179	TRAV34	A0A0B4J273	112 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179		A0A1W2PNV4	684 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	TLCD2	A6NGC4	264 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	CBY3	A6NI87	242 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	TMEM156	Q8N614	296 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	SLC38A9	Q8NBW4	561 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR10A7	Q8NGE5	316 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	NLRC5	Q86WI3	1866 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	HEATR5A	Q86XA9	2040 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179		A0A0J9YY10	115 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms