RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 STMN3Q9NZ72 180 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 MRM2Q9UI43 246 aaKnown RBP2□□□□□ -2.09
SCAMP1-205ENST00000614488 PPIL1Q9Y3C6 166 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 CACNA1DQ01668 2161 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 PLXNB1O43157 2135 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 SVILO95425 2214 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 ADCY9O60503 1353 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 PCDH11XQ9BZA7 1347 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 A0A1W2PRD5 423 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 H7C0C1 242 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 HSBP1O75506 76 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 DEDDO75618 318 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 SC5DO75845 299 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 FARS2O95363 451 aaKnown RBP1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 CD160O95971 181 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 RPN2P04844 631 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 SYT1P21579 422 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 PSMB6P28072 239 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 UGT2B10P36537 528 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 GPR1P46091 355 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 KCNJ3P48549 501 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 CDC34P49427 236 aaPredicted RBP1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 UBE2KP61086 200 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 MEF2CQ06413 473 aaPredicted RBP1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 ZNF33AQ06730 810 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 PSG3Q16557 428 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 CDKL4Q5MAI5 379 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 TBPL2Q6SJ96 375 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 MDP1Q86V88 176 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 JAGN1Q8N5M9 183 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 SNX31Q8N9S9 440 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 TFGQ92734 400 aaPredicted RBP1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 GTF2H4Q92759 462 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 RNF170Q96K19 258 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 KCNS1Q96KK3 526 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 GPR82Q96P67 336 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 MARVELD1Q9BSK0 173 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 MED10Q9BTT4 135 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 NUDT9Q9BW91 350 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 ACTR3CQ9C0K3 210 aaPredicted RBP1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 SLIRPQ9GZT3 109 aaKnown RBP1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 PIGUQ9H490 435 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 ANKHQ9HCJ1 492 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 TAS2R1Q9NYW7 299 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 CLEC2DQ9UHP7 191 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 SLC17A4Q9Y2C5 497 aa1.99□□□□□ -2.09
SCAMP1-205ENST00000614488 ADGRA3Q8IWK6 1321 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 PRR14LQ5THK1 2151 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 IGKV1-27A0A075B6S5 117 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 MGAT4DA6NG13 374 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 CENPXA8MT69 81 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 C4orf51C9J302 202 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 ITGB1BP1O14713 200 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 COCHO43405 550 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 XRCC2O43543 280 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 ATP5HO75947 161 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 MYO1DO94832 1006 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 HPRT1P00492 218 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 CST4P01036 141 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 HLA-HP01893 362 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 HRES1P13985 223 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 HTR2CP28335 458 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 OR1E1P30953 314 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 ZNF121P58317 390 aaPredicted RBP1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 MLF1P58340 268 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 VAMP3Q15836 100 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 TNXAQ16473 311 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 DEFB134Q4QY38 66 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 SLC35D2Q76EJ3 337 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 BOD1L2Q8IYS8 172 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 C17orf78Q8N4C9 275 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 PHOSPHO2Q8TCD6 241 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 BAALCQ8WXS3 180 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 LRRC45Q96CN5 670 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 C9orf72Q96LT7 481 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 C7orf50Q9BRJ6 194 aaKnown RBP1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 UTP23Q9BRU9 249 aaKnown RBP1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 WDR55Q9H6Y2 383 aaPredicted RBP1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 UCK1Q9HA47 277 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 CD209Q9NNX6 404 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 ACP6Q9NPH0 428 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 OR2S2Q9NQN1 319 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 SLC39A1Q9NY26 324 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 NKIRAS1Q9NYS0 192 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 IL20Q9NYY1 176 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 EMC3Q9P0I2 261 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 NXT1Q9UKK6 140 aaKnown RBP1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 YARS2Q9Y2Z4 477 aaKnown RBP1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 LRRC42Q9Y546 428 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 URGCP-MRPS24S4R325 110 aa1.98□□□□□ -2.09
SCAMP1-205ENST00000614488 FABP12A6NFH5 140 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 J3QRE1 110 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 SLC9A3R1O14745 358 aaPredicted RBP1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 RAD1O60671 282 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 ADAP1O75689 374 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 VAPBO95292 243 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 HSPD1P10809 573 aaKnown RBP1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 CTRB1P17538 263 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 CD70P32970 193 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 EVI2BP34910 448 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms