RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	JMJD8	Q96S16	334 aa		11.15	□□□□□ -0.62
ARHGEF1-222	ENST00000600517	ALG8	Q9BVK2	526 aa		11.15	□□□□□ -0.62
ARHGEF1-222	ENST00000600517	C19orf24	Q9BVV8	132 aa		11.15	□□□□□ -0.62
ARHGEF1-222	ENST00000600517	JAM3	Q9BX67	310 aa		11.15	□□□□□ -0.62
ARHGEF1-222	ENST00000600517	ISG20L2	Q9H9L3	353 aa	Known RBP	11.15	□□□□□ -0.62
ARHGEF1-222	ENST00000600517	PLEKHA1	Q9HB21	404 aa		11.15	□□□□□ -0.62
ARHGEF1-222	ENST00000600517	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.15	□□□□□ -0.62
ARHGEF1-222	ENST00000600517	ZNF222	Q9UK12	451 aa		11.15	□□□□□ -0.62
ARHGEF1-222	ENST00000600517	SLC7A11	Q9UPY5	501 aa		11.15	□□□□□ -0.62
ARHGEF1-222	ENST00000600517	IGKV1D-17	A0A075B6S4	117 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	OR4C45	A6NMZ5	311 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517		H3BSH0	61 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	SYNGR1	O43759	233 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	GATB	O75879	557 aa	Known RBP	11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	RGS9	O75916	674 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	CLIC3	O95833	236 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	PLAT	P00750	562 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	PGA5	P0DJD9	388 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	IGHV4-38-2	P0DP08	117 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	PSG2	P11465	335 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	FUT6	P51993	359 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	IL13RA1	P78552	427 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	GABPB1	Q06547	395 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	SMN1	Q16637	294 aa	Known RBP	11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	DGUOK	Q16854	277 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	LRRC10	Q5BKY1	277 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	C9orf139	Q6ZV77	190 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	ANGPTL5	Q86XS5	388 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	CALHM1	Q8IU99	346 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	BCL6B	Q8N143	479 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	CYGB	Q8WWM9	190 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	ST8SIA4	Q92187	359 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	GAFA1	Q96PS6	74 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	NRIP2	Q9BQI9	281 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	PKIB	Q9C010	78 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	CHST5	Q9GZS9	411 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	DCLRE1B	Q9H816	532 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	CNTD2	Q9H8S5	307 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	POLDIP2	Q9Y2S7	368 aa		11.14	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	FAM230A	A0A1W2PPH8	454 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	NKX6-3	A6NJ46	265 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517		E9PI62	339 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	SIGLEC5	O15389	551 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	TFF1	P04155	84 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	RPSA	P08865	295 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	LIMS3	P0CW19	117 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	LIMS4	P0CW20	117 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	MMP9	P14780	707 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	BPIFB3	P59826	476 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	ERVK11-1	P61568	191 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	IL24	Q13007	206 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	MRPL28	Q13084	256 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	IKZF1	Q13422	519 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	IL18R1	Q13478	541 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	ALKBH1	Q13686	389 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	ACP7	Q6ZNF0	438 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	UTS2B	Q765I0	119 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	SETD9	Q8NE22	299 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	DNAAF1	Q8NEP3	725 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	FGGY	Q96C11	551 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	ADAT3	Q96EY9	351 aa	Predicted RBP	11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	SDSL	Q96GA7	329 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	ZNF488	Q96MN9	340 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	WDFY2	Q96P53	400 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	TBX15	Q96SF7	602 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	PCGF1	Q9BSM1	259 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	DCTN5	Q9BTE1	182 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	SIRPD	Q9H106	197 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	HHLA2	Q9UM44	414 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	MAB21L2	Q9Y586	359 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	HSPE1-MOB4	S4R3N1	261 aa		11.13	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	DOCK11	Q5JSL3	2073 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	IGKV1-27	A0A075B6S5	117 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	IGHV3OR16-10	A0A075B7F0	116 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517		H0YAE9	185 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	TOX4	O94842	621 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	SFTPB	P07988	381 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	SELL	P14151	372 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	DCK	P27707	260 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	GABRA2	P47869	451 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	GBX2	P52951	348 aa	Predicted RBP	11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	CAV3	P56539	151 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	ARF6	P62330	175 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	CNN3	Q15417	329 aa	Known RBP	11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	SMIM21	Q3B7S5	101 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	METTL11B	Q5VVY1	283 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	RBMS3	Q6XE24	437 aa	Known RBP	11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	CD177	Q8N6Q3	437 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	ZNF676	Q8N7Q3	588 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	SIGLECL1	Q8N7X8	197 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	ZDHHC22	Q8N966	263 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	OR10AC1	Q8NH08	325 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	C8orf46	Q8TAG6	207 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	CNIH3	Q8TBE1	160 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	HAVCR2	Q8TDQ0	301 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	NPRL2	Q8WTW4	380 aa		11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.12	□□□□□ -0.63
ARHGEF1-222	ENST00000600517	HES4	Q9HCC6	221 aa		11.12	□□□□□ -0.63

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