RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 HOXA5P20719 270 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 SRD5A2P31213 254 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 GNALP38405 381 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 LBHQ53QV2 105 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 HES3Q5TGS1 186 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 SLC25A42Q86VD7 318 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 OR9K2Q8NGE7 335 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 ADAMTS17Q8TE56 1095 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 FGGYQ96C11 551 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 SULT4A1Q9BR01 284 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 LRRC3CA6NJW4 275 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 ZNF878C9JN71 531 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 SYT7O43581 403 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 IFNA10P01566 189 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 AMY2AP04746 511 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 FCGR3AP08637 254 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 ZNF735P0CB33 412 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 IGFBP3P17936 291 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 DVL1P1P54792 670 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 B3GALT5-AS1P59052 145 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 SPCS3P61009 180 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 RAB4BP61018 213 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 WIPI1Q5MNZ9 446 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 BIVMQ86UB2 503 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 PHB2Q99623 299 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 LOC390937A0A1W2PQ73 354 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 PINLYPA6NC86 204 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 A6NLC8 198 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 TERTO14746 1132 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 LY86O95711 162 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 IFNA17P01571 189 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 CRHP06850 196 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 RD3LP0DJH9 198 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 HTR2CP28335 458 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 MAS1LP35410 378 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 EIF5AL1Q6IS14 154 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 FAHD2BQ6P2I3 314 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 COMMD2Q86X83 199 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 ARRDC1Q8N5I2 433 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 OR51E1Q8TCB6 317 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 FAHD2AQ96GK7 314 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 KIRREL1Q96J84 757 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 RSRP1Q9BUV0 290 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 GFOD1Q9NXC2 390 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 LRFN1Q9P244 771 aa14.97□□□□□ -0.01
SHKBP1-205ENST00000594973 DOCK10Q96BY6 2186 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 LOC100289279A0A1B0GTE1 492 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 A0A1B0GWJ7 208 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 MEIS3P1A6NDR6 274 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 GJE1A6NN92 205 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 TNFSF15O95150 251 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 VAMP5O95183 116 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 FSTP19883 344 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 GDF1P27539 372 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 GUCA1AP43080 201 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 CD81P60033 236 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 EIF5AP63241 154 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 PYY3Q5JQD4 70 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 DHRS11Q6UWP2 260 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 LRRC18Q8N456 261 aa14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 RBM24Q9BX46 236 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 CHMP1AQ9HD42 196 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-205ENST00000594973 A0A0B4J2A0 478 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 SMAD9O15198 467 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 ANOS1P23352 680 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 CDX1P47902 265 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 CYCSP99999 105 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 SSX2Q16385 188 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 ZNF383Q8NA42 475 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 DCUN1D4Q92564 292 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 SLAMF9Q96A28 289 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 SEH1LQ96EE3 360 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 SLC2A8Q9NY64 477 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 SHPKQ9UHJ6 478 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 CSAG2Q9Y5P2 127 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 CARD18P57730 90 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 ZNF121P58317 390 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 HYAL4Q2M3T9 481 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 KRBOX4Q5JUW0 171 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 FAM166AQ6J272 317 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 BTNL8Q6UX41 500 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 ZIC4Q8N9L1 334 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 ADAT3Q96EY9 351 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 GPR87Q9BY21 358 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 NMES1Q9C002 83 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 ATG5Q9H1Y0 275 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 PNRC2Q9NPJ4 139 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 IL17BQ9UHF5 180 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 DMXL1Q9Y485 3027 aa14.95□□□□□ -0.02
SHKBP1-205ENST00000594973 C7orf77A4D0Y5 90 aa14.94□□□□□ -0.02
SHKBP1-205ENST00000594973 S100A2P29034 98 aa14.94□□□□□ -0.02
SHKBP1-205ENST00000594973 SUCLG1P53597 346 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-205ENST00000594973 RAC3P60763 192 aa14.94□□□□□ -0.02
SHKBP1-205ENST00000594973 EIF3IQ13347 325 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-205ENST00000594973 ETV3LQ6ZN32 361 aa14.94□□□□□ -0.02
SHKBP1-205ENST00000594973 ABHD12BQ7Z5M8 362 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-205ENST00000594973 GGNQ86UU5 652 aa14.94□□□□□ -0.02
SHKBP1-205ENST00000594973 TMEM123Q8N131 208 aa14.94□□□□□ -0.02
SHKBP1-205ENST00000594973 BPIFB2Q8N4F0 458 aa14.94□□□□□ -0.02
SHKBP1-205ENST00000594973 ZDHHC22Q8N966 263 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms