RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 NOS1APO75052 506 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 IGHA1P01876 353 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 UBCP0CG48 685 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 MPZP25189 248 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 UBA52P62987 128 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 IL13RA1P78552 427 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 GALEQ14376 348 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 LRRC10Q5BKY1 277 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 BRD3OSQ6XYD6 125 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 ACP7Q6ZNF0 438 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 LHFPL3Q86UP9 236 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 ANGPTL5Q86XS5 388 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 CALHM1Q8IU99 346 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 C8orf46Q8TAG6 207 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 RDH12Q96NR8 316 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 DCTN5Q9BTE1 182 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 ADI1Q9BV57 179 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 MAB21L2Q9Y586 359 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 IGKV1-27A0A075B6S5 117 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 CENPVL3A0A0U1RRI6 287 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 NKX6-3A6NJ46 265 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 J3QLW9 94 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 WBP4O75554 376 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 ISG15P05161 165 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 ZNF19P17023 458 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 GABRA2P47869 451 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 CAV3P56539 151 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 LRRC36Q1X8D7 754 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 GPR157Q5UAW9 335 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 METTL11BQ5VVY1 283 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 RBMS3Q6XE24 437 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 TRMT10AQ8TBZ6 339 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 C10orf35Q96D05 121 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 C4orf36Q96KX1 117 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 DMRTB1Q96MA1 342 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 NRIP2Q9BQI9 281 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 CHST5Q9GZS9 411 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 PLEKHA1Q9HB21 404 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 SLC25A10Q9UBX3 287 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 KPTNQ9Y664 436 aa15.24■□□□□ 0.03
SHKBP1-202ENST00000593764 DNAJC9-AS1A6NH13 148 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 RFPL4AA6NLU0 287 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 RFPL4AL1F8VTS6 287 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 FADS2O95864 444 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 PRTN3P24158 256 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 CCR9P51686 369 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 BPIFB3P59826 476 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 ERVK11-1P61568 191 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 RAB40BQ12829 278 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 SMN1Q16637 294 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 TMEM244Q5VVB8 128 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 LPCAT4Q643R3 524 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 RUSC1-AS1Q66K80 236 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 CD177Q8N6Q3 437 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 ZNRF1Q8ND25 227 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 OR52I1Q8NGK6 324 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 NPRL2Q8WTW4 380 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 ADAT3Q96EY9 351 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 SDSLQ96GA7 329 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 DUX5Q96PT3 197 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 ALG8Q9BVK2 526 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 PRDM13Q9H4Q3 707 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 ISG20L2Q9H9L3 353 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 HES4Q9HCC6 221 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 ERVK13-1Q9NX77 482 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 POLDIP2Q9Y2S7 368 aa15.23■□□□□ 0.03
SHKBP1-202ENST00000593764 MDFIC2A0A1B0GVS7 189 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 FAM230AA0A1W2PPH8 454 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 OR4C45A6NMZ5 311 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 ANKRD65E5RJM6 399 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 CLIC3O95833 236 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 HTR1AP08908 422 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 FUT6P51993 359 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 ACTA2P62736 377 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 ACTG2P63267 376 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 IL24Q13007 206 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 BAMBIQ13145 260 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 PDCD1Q15116 288 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 RCN1Q15293 331 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 DEFB112Q30KQ8 113 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 SMIM21Q3B7S5 101 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 EGFL6Q8IUX8 553 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 SYS1Q8N2H4 156 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 ZNF555Q8NEP9 628 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 OR10AC1Q8NH08 325 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 PKIBQ9C010 78 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 INPP5EQ9NRR6 644 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 SLC7A11Q9UPY5 501 aa15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 RPL36Q9Y3U8 105 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-202ENST00000593764 IGKV1-9A0A0C4DH69 117 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 TMEM89A2RUT3 159 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 GATBO75879 557 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 PEX2P28328 305 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 ALKBH1Q13686 389 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 ZNF691Q5VV52 312 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 BATF2Q8N1L9 274 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 Q8N7P7 452 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 OR51A4Q8NGJ6 313 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 PP6455Q8WZ26 134 aa15.21■□□□□ 0.03
SHKBP1-202ENST00000593764 H1FXQ92522 213 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms