RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MED12LQ86YW9 2145 aa15.68■□□□□ 0.1
SMPD3-211ENST00000568373 PRRC2CQ9Y520 2896 aaKnown RBP15.68■□□□□ 0.1
SMPD3-211ENST00000568373 ZFHX4Q86UP3 3567 aa15.68■□□□□ 0.1
SMPD3-211ENST00000568373 IGKV1-12A0A0C4DH73 117 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 FIGNL2A6NMB9 653 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 SNAPC5O75971 98 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 IGKV1D-12P01611 117 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 SERPINA5P05154 406 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 PLP2Q04941 152 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 PDZK1IP1Q13113 114 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 NKAPLQ5M9Q1 402 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 LY6G6FQ5SQ64 297 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 SIGIRRQ6IA17 410 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 OR56B2PQ8NGI1 322 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 OR1K1Q8NGR3 316 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 MARCH1Q8TCQ1 289 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 IL36GQ9NZH8 169 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 NOP16Q9Y3C1 178 aaKnown RBP15.67■□□□□ 0.1
SMPD3-211ENST00000568373 C9orf170A2RU37 121 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 ZNF850A8MQ14 1090 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 CEACAM18A8MTB9 384 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 MALLQ13021 153 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 CLN3Q13286 438 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 GRK1Q15835 563 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 TAF9Q16594 264 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 DPPA2Q7Z7J5 298 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 CSNK2A3Q8NEV1 391 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 ELMOD3Q96FG2 381 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 TMEM165Q9HC07 324 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 HSF4Q9ULV5 492 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 CFAP47Q6ZTR5 3102 aa15.67■□□□□ 0.1
SMPD3-211ENST00000568373 TRAV17A0A0B4J275 112 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 EFSO43281 561 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 SS18L1O75177 396 aaPredicted RBP15.66■□□□□ 0.1
SMPD3-211ENST00000568373 NFYAP23511 347 aaPredicted RBP15.66■□□□□ 0.1
SMPD3-211ENST00000568373 OR3A3P47888 321 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 OR3A2P47893 321 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 IL13RA1P78552 427 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 HIKESHIQ53FT3 197 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 MRPL21Q7Z2W9 205 aaKnown RBP15.66■□□□□ 0.1
SMPD3-211ENST00000568373 ADAD2Q8NCV1 583 aaKnown RBP15.66■□□□□ 0.1
SMPD3-211ENST00000568373 ZNF680Q8NEM1 530 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 OR5M8Q8NGP6 311 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 MITD1Q8WV92 249 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 EMG1Q92979 244 aaKnown RBP15.66■□□□□ 0.1
SMPD3-211ENST00000568373 MRPS24Q96EL2 167 aaKnown RBP15.66■□□□□ 0.1
SMPD3-211ENST00000568373 GMPPAQ96IJ6 420 aaPredicted RBP15.66■□□□□ 0.1
SMPD3-211ENST00000568373 ZNHIT1O43257 154 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 MPC2O95563 127 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 CEACAM1P13688 526 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 CXCL2P19875 107 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 TAS2R31P59538 309 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 RPUSD3Q6P087 351 aaKnown RBP15.66■□□□□ 0.1
SMPD3-211ENST00000568373 LPCAT3Q6P1A2 487 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 P4HA3Q7Z4N8 544 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 TMEM17Q86X19 198 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 OSR2Q8N2R0 312 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 OR5AP2Q8NGF4 316 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 MAFIPQ8WZ33 124 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 BCL2L2Q92843 193 aaPredicted RBP15.66■□□□□ 0.1
SMPD3-211ENST00000568373 PAPOLGQ9BWT3 736 aaKnown RBP15.66■□□□□ 0.1
SMPD3-211ENST00000568373 CLEC4MQ9H2X3 399 aaPredicted RBP15.66■□□□□ 0.1
SMPD3-211ENST00000568373 GPR160Q9UJ42 338 aa15.66■□□□□ 0.1
SMPD3-211ENST00000568373 TNRC6AQ8NDV7 1962 aaKnown RBP15.65■□□□□ 0.1
SMPD3-211ENST00000568373 HMSDA8MTL9 139 aa15.65■□□□□ 0.1
SMPD3-211ENST00000568373 AKR1C4P17516 323 aa15.65■□□□□ 0.1
SMPD3-211ENST00000568373 C4BPBP20851 252 aa15.65■□□□□ 0.1
SMPD3-211ENST00000568373 SEC61A1P61619 476 aaKnown RBP15.65■□□□□ 0.1
SMPD3-211ENST00000568373 HLXQ14774 488 aaPredicted RBP15.65■□□□□ 0.1
SMPD3-211ENST00000568373 DEFB109BQ30KR1 87 aa15.65■□□□□ 0.1
SMPD3-211ENST00000568373 LHFPL1Q86WI0 220 aa15.65■□□□□ 0.1
SMPD3-211ENST00000568373 NAXEQ8NCW5 288 aa15.65■□□□□ 0.1
SMPD3-211ENST00000568373 DPCDQ9BVM2 203 aaPredicted RBP15.65■□□□□ 0.1
SMPD3-211ENST00000568373 ZNF701Q9NV72 531 aaPredicted RBP15.65■□□□□ 0.1
SMPD3-211ENST00000568373 CLCF1Q9UBD9 225 aa15.65■□□□□ 0.1
SMPD3-211ENST00000568373 GPR132Q9UNW8 380 aa15.65■□□□□ 0.1
SMPD3-211ENST00000568373 MCRIP1C9JLW8 97 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 M0R233 179 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 NGFP01138 241 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 SFTPBP07988 381 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 NPY4RP50391 375 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 PIGYQ3MUY2 71 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 CHRFAM7AQ494W8 412 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 CALHM1Q8IU99 346 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 FBXL14Q8N1E6 418 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 OR13G1Q8NGZ3 307 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 OR51F2Q8NH61 342 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 NANOS1Q8WY41 292 aaKnown RBP15.64■□□□□ 0.09
SMPD3-211ENST00000568373 PHB2Q99623 299 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 PCDHB16Q9NRJ7 776 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 GLRX2Q9NS18 164 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 EHFQ9NZC4 300 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 ZNF581Q9P0T4 197 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 STARD10Q9Y365 291 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 ZNF891A8MT65 544 aaPredicted RBP15.64■□□□□ 0.09
SMPD3-211ENST00000568373 L7N2F9 121 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 GEMIN2O14893 280 aaKnown RBP15.64■□□□□ 0.09
SMPD3-211ENST00000568373 HLA-GP17693 338 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 VAMP1P23763 118 aa15.64■□□□□ 0.09
SMPD3-211ENST00000568373 CHATP28329 748 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms