RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TMEM27Q9HBJ8 222 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ADGRL4Q9HBW9 690 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 APMAPQ9HDC9 416 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 C12orf4Q9NQ89 552 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 RDH8Q9NYR8 311 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 KCNG2Q9UJ96 466 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 SLC6A5Q9Y345 797 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 WDR45Q9Y484 360 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 UNC13CQ8NB66 2214 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 TRAV6A0A075B6T7 132 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ANKRD20A5PA0PJZ0 165 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 SULT1C2O00338 296 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 CCL21O00585 134 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 IMPA2O14732 288 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 PHYHO14832 338 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 KHDRBS3O75525 346 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 NDUFB6O95139 128 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 AIFM1O95831 613 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 TACSTD2P09758 323 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 CFC1BP0CG36 223 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 CFC1P0CG37 223 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 UBBP0CG47 229 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 UBCP0CG48 685 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 TBXA2RP21731 343 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 S100A11P31949 105 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 TIMP3P35625 211 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 MAGEB1P43366 347 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 HOXA1P49639 335 aaPredicted RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 RPS15AP62244 130 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 RPS27AP62979 156 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 UBA52P62987 128 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 STX4Q12846 297 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 TSC22D1Q15714 1073 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 MEP1BQ16820 701 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 FFAR4Q5NUL3 377 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 PLBD1Q6P4A8 553 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 UQCC3Q6UW78 93 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ARSKQ6UWY0 536 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 TFAP2EQ6VUC0 442 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 COMTD1Q86VU5 262 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 UBE2J2Q8N2K1 259 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ZFP41Q8N8Y5 198 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ACOT4Q8N9L9 421 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 CDRT4Q8N9R6 151 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 OR5D16Q8NGK9 328 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 OR5AR1Q8NGP9 310 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 OR52N5Q8NH56 324 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF671Q8TAW3 534 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 RNASE8Q8TDE3 154 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 CCDC107Q8WV48 283 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 HAS2Q92819 552 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 PTP4A1Q93096 173 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 PHYHIPLQ96FC7 376 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 SLC19A3Q9BZV2 496 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 LYRM4Q9HD34 91 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 HRASLSQ9HDD0 168 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 MRPS30Q9NP92 439 aaKnown RBP3.55□□□□□ -1.84
LINC00561-201ENST00000565815 SDHAF2Q9NX18 166 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 IL20RAQ9UHF4 553 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ICAM5Q9UMF0 924 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 MOKQ9UQ07 419 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 SPACA6W5XKT8 324 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 DMXL2Q8TDJ6 3036 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 ZZEF1O43149 2961 aa3.55□□□□□ -1.84
LINC00561-201ENST00000565815 DOCK9Q9BZ29 2069 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 A0A0D9SG52 128 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 MPTX1A8MV57 137 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 PRR32B1ATL7 298 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 C17orf105B2RV13 164 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 MCRIP1C9JLW8 97 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 TEX46H3BTG2 121 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ABCD4O14678 606 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ARPC3O15145 178 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 LANCL1O43813 399 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 GALR3O60755 368 aaPredicted RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 SCRG1O75711 98 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 MPC2O95563 127 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ACSM4P0C7M7 580 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 IFI30P13284 250 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 RPA2P15927 270 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 KLK2P20151 261 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 RAB3AP20336 220 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 RORAP35398 523 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 CD79BP40259 229 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 GDI2P50395 445 aaKnown RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF136P52737 540 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 S100A12P80511 92 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 FLI1Q01543 452 aaPredicted RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 TNFRSF17Q02223 184 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF85Q03923 595 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 GK2Q14410 553 aaPredicted RBP3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ZMYND11Q15326 602 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 CLEC12AQ5QGZ9 265 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF836Q6ZNA1 936 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF550Q7Z398 422 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 OOSP2Q86WS3 158 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 TMEM17Q86X19 198 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 VRK2Q86Y07 508 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 NKAIN4Q8IVV8 208 aa3.54□□□□□ -1.84
LINC00561-201ENST00000565815 PDZD9Q8IXQ8 264 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms