RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 HLA-DRB3P79483 266 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 HABP2Q14520 560 aaPredicted RBP17.25■□□□□ 0.35
SUDS3-204ENST00000543473 CLEC18CQ8NCF0 446 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 NAA60Q9H7X0 242 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 A0A1W2PPE2 198 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 H0Y8G0 127 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 SPINT2O43291 252 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 OR5AC1P0C628 307 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 PRAMEF5Q5TYX0 476 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 PRAMEF6Q5VXH4 476 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 RPS19BP1Q86WX3 136 aaKnown RBP17.25■□□□□ 0.35
SUDS3-204ENST00000543473 CNEP1R1Q8N9A8 125 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 SP7Q8TDD2 431 aaPredicted RBP17.25■□□□□ 0.35
SUDS3-204ENST00000543473 NRIP2Q9BQI9 281 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 MASP2O00187 686 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 ABCD4O14678 606 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 RER1O15258 196 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 FUT3P21217 361 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 NANOS3P60323 173 aaKnown RBP17.25■□□□□ 0.35
SUDS3-204ENST00000543473 PLGLAQ15195 96 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 MESTQ5EB52 335 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 TMEM92Q6UXU6 159 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 SLC35G3Q8N808 338 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 LOC105371267A0A1B0GV96 52 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 XKRY2A2RUG3 117 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 COL9A1P20849 921 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 RANP62826 216 aaKnown RBP17.24■□□□□ 0.35
SUDS3-204ENST00000543473 ISXQ2M1V0 245 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 JMJD6Q6NYC1 403 aaPredicted RBP17.24■□□□□ 0.35
SUDS3-204ENST00000543473 SPSB1Q96BD6 273 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 MTCH1Q9NZJ7 389 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 DTYMKP23919 212 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 MPGP29372 298 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 TOMM20LQ6UXN7 152 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 FAAP24Q9BTP7 215 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 ZGLP1P0C6A0 271 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 LIMK1P53667 647 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 KRTDAPP60985 99 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 DUSP2Q05923 314 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 TIGITQ495A1 244 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 ZAR1Q86SH2 424 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 GRPP07492 148 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 RPL29P47914 159 aaKnown RBP17.24■□□□□ 0.35
SUDS3-204ENST00000543473 PSG6Q00889 435 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 VN1R1Q9GZP7 353 aa17.24■□□□□ 0.35
SUDS3-204ENST00000543473 MOSPD3O75425 235 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 HAAOP46952 286 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 SUMO3P55854 103 aaPredicted RBP17.23■□□□□ 0.35
SUDS3-204ENST00000543473 ELOA3CA0A087WX78 387 aaPredicted RBP17.23■□□□□ 0.35
SUDS3-204ENST00000543473 ANKUB1A6NFN9 424 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 NPBWR1P48145 328 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 C20orf196Q8IYI0 205 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 RIMS4Q9H426 269 aaPredicted RBP17.23■□□□□ 0.35
SUDS3-204ENST00000543473 B3GAT1Q9P2W7 334 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 HOXD4P09016 255 aaPredicted RBP17.23■□□□□ 0.35
SUDS3-204ENST00000543473 TPPP2P59282 170 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 PPP1CBP62140 327 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 TMEM241Q24JQ0 296 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 YRDCQ86U90 279 aaKnown RBP17.23■□□□□ 0.35
SUDS3-204ENST00000543473 RFLNBQ8N5W9 214 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 ASB5Q8WWX0 329 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 HDGFL3Q9Y3E1 203 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 LIPGQ9Y5X9 500 aa17.23■□□□□ 0.35
SUDS3-204ENST00000543473 LAMTOR1Q6IAA8 161 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 ADAD2Q8NCV1 583 aaKnown RBP17.22■□□□□ 0.35
SUDS3-204ENST00000543473 C8orf44Q96CB5 159 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 LRRC61Q9BV99 259 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 PARD6AQ9NPB6 346 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 SLC35D1Q9NTN3 355 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 PTP4A3O75365 173 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 EDDM3AQ14507 147 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 SURF2Q15527 256 aaPredicted RBP17.22■□□□□ 0.35
SUDS3-204ENST00000543473 EXTL1Q92935 676 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 PGLYRP3Q96LB9 341 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 PARP11Q9NR21 331 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 ICAM5Q9UMF0 924 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 LMO7DNF2Z398 122 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 ADAM20O43506 726 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 TIMM8AO60220 97 aaPredicted RBP17.22■□□□□ 0.35
SUDS3-204ENST00000543473 FUT6P51993 359 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 UBE2G2P60604 165 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 VAMP3Q15836 100 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 FAM209BQ5JX69 171 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 RBMXL3Q8N7X1 1067 aaKnown RBP17.22■□□□□ 0.35
SUDS3-204ENST00000543473 FBXO17Q96EF6 278 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 TRAPPC1Q9Y5R8 145 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 IGHV3-15A0A0B4J1V0 119 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 CENPVL1A0A0U1RR11 272 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 SOCS1O15524 211 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 NAAAQ02083 359 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 PMS2P11Q13670 270 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 PDCD1Q15116 288 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 SSX7Q7RTT5 188 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 ZNF383Q8NA42 475 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 IFI44Q8TCB0 444 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 MRPS24Q96EL2 167 aaKnown RBP17.22■□□□□ 0.35
SUDS3-204ENST00000543473 CIB3Q96Q77 187 aaPredicted RBP17.22■□□□□ 0.35
SUDS3-204ENST00000543473 VAMP8Q9BV40 100 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 CTDSP1Q9GZU7 261 aa17.22■□□□□ 0.35
SUDS3-204ENST00000543473 UBE2L5PA0A1B0GUS4 154 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms