RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 NKAPLQ5M9Q1 402 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 DHRS7BQ6IAN0 325 aaPredicted RBP4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 GUSBP11Q6P575 273 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 COMMD2Q86X83 199 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 LDLRAD3Q86YD5 345 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 PUSL1Q8N0Z8 303 aaKnown RBP4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 SVBPQ8N300 66 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 PNLDC1Q8NA58 520 aaKnown RBP4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 BHLHE23Q8NDY6 225 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 GJC3Q8NFK1 279 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 OR51T1Q8NGJ9 327 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 OR10Z1Q8NGY1 313 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 HAS2Q92819 552 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 ARL11Q969Q4 196 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 CLDN23Q96B33 292 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 SAT2Q96F10 170 aaPredicted RBP4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 LIN37Q96GY3 246 aaPredicted RBP4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 PGAM5Q96HS1 289 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 SMIM8Q96KF7 97 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 GPER1Q99527 375 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 DEFB126Q9BYW3 111 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 NELFAQ9H3P2 528 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 IFT22Q9H7X7 185 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 WDR54Q9H977 334 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 SH2D2AQ9NP31 389 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 ACKR4Q9NPB9 350 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 LPAR3Q9UBY5 353 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF629Q9UEG4 869 aaPredicted RBP4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 NDRG3Q9UGV2 375 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 PCDHGA1Q9Y5H4 931 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 IGKV1D-8A0A087WSZ0 117 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 OR5H15A6NDH6 313 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 STMND1H3BQB6 276 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 GPR31O00270 319 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 SDCBPO00560 298 aaPredicted RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 TP53I11O14683 189 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 MSTNO14793 375 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 ZIC3O60481 467 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 EIF1BO60739 113 aaKnown RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 VAMP5O95183 116 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 PLATP00750 562 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 PDGFBP01127 241 aaPredicted RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 CTSDP07339 412 aaPredicted RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 PET100P0DJ07 73 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 HKR1P10072 659 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 FGF5P12034 268 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF708P17019 499 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 PI3P19957 117 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 CRYGSP22914 178 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 CPT2P23786 658 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 EPHA8P29322 1005 aaPredicted RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 BLVRBP30043 206 aaPredicted RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 SFTPDP35247 375 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 NBL1P41271 181 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 OR3A2P47893 321 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 CSNK1A1P48729 337 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 ARHGDIBP52566 201 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 CSNK2A1P68400 391 aaPredicted RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 SRSF3P84103 164 aaKnown RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 RAB32Q13637 225 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 RBM39Q14498 530 aaKnown RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 GUCA2BQ16661 112 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 HFEQ30201 348 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 KRTAP27-1Q3LI81 207 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 TMEM268Q5VZI3 342 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 ASCL4Q6XD76 172 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 C1orf229Q6ZS94 237 aaPredicted RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 ZIC4Q8N9L1 334 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 CSNK2A3Q8NEV1 391 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 OR51F2Q8NH61 342 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 PAQR8Q8TEZ7 354 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 TMED6Q8WW62 240 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 INTS12Q96CB8 462 aaKnown RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 IMMP1LQ96LU5 166 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 Q96M66 194 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 PSMG3-AS1Q96PY0 264 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 TSNAXQ99598 290 aaKnown RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 ST6GALNAC5Q9BVH7 336 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 DUSP23Q9BVJ7 150 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 SEC11CQ9BY50 192 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 ANGPTL4Q9BY76 406 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 PROK2Q9HC23 129 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF160Q9HCG1 818 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC39A1Q9NY26 324 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 PRR13Q9NZ81 148 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 EHFQ9NZC4 300 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 WNT16Q9UBV4 365 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 TUBD1Q9UJT1 453 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 MCTS1Q9ULC4 181 aaKnown RBP4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 PRELID3BQ9Y3B1 194 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 RALGAPA1Q6GYQ0 2036 aa4.53□□□□□ -1.68
ATPAF1-212ENST00000542495 IGHV1-45A0A0A0MS14 117 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 CRYM-AS1A6NIL9 109 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 DHHO43323 396 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 IFNA2P01563 188 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 APOC1P02654 83 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 GAPDHP04406 335 aaKnown RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 HEXAP06865 529 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 FCGR2AP12318 317 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 LIFP15018 202 aa4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms