RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 HERPUD1Q15011 391 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 LY6EQ16553 131 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 LRRC75BQ2VPJ9 315 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 ZNF684Q5T5D7 378 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 MKXQ8IYA7 352 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 POC1AQ8NBT0 407 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 OR4C13Q8NGP0 309 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 OR5K1Q8NHB7 308 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 PPP1R35Q8TAP8 253 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 RORBQ92753 470 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 AJUBAQ96IF1 538 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 OR8B4Q96RC9 309 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 HEXA-AS1Q9H8Q6 139 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 RAB18Q9NP72 206 aa16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 NUFIP1Q9UHK0 495 aaKnown RBP16.02■□□□□ 0.16
TNFRSF1B-204ENST00000536782 PLXNB1O43157 2135 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 CCDC182A6NF36 153 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 DHRS3O75911 302 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 KIR2DS4P43632 304 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 RPL31P62899 125 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 CBX1P83916 185 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 AANATQ16613 207 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 C11orf88Q6PI97 169 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 ZNF561Q8N587 486 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 CD177Q8N6Q3 437 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 PPP1R14AQ96A00 147 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 ZNF488Q96MN9 340 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 TTTY10Q9BZA0 68 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 DNAJB9Q9UBS3 223 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 IKZF2Q9UKS7 526 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 COPS3Q9UNS2 423 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 SIGLEC9Q9Y336 463 aa16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 TET2Q6N021 2002 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1B-204ENST00000536782 NOTCH3Q9UM47 2321 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 hCG_1809904A0A1W2PP81 198 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 A0A1W2PPE2 198 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 A0A1W2PR64 198 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 A0A1W2PRV1 198 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 PRR32B1ATL7 298 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 FKBP6O75344 327 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 PRDX2P32119 198 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 HAAOP46952 286 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 EFNB2P52799 333 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 CRISP1P54107 249 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 TMEM200BQ69YZ2 307 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 ZNF573Q86YE8 665 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 DNAJC9Q8WXX5 260 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 RANBP3Q9H6Z4 567 aaPredicted RBP16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 PAPOLBQ9NRJ5 636 aaKnown RBP16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 USE1Q9NZ43 259 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 GTF2A1LQ9UNN4 478 aa16■□□□□ 0.15
TNFRSF1B-204ENST00000536782 J3QT63 122 aa15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 SYNGR1O43759 233 aa15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 NOS1APO75052 506 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 TTRP02766 147 aa15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 PGA5P0DJD9 388 aa15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 LGALS4P56470 323 aa15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 MFGE8Q08431 387 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 CLVS2Q5SYC1 327 aa15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 CRIP3Q6Q6R5 217 aa15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 OR2T27Q8NH04 317 aa15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 OR2T6Q8NHC8 308 aa15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 CNN2Q99439 309 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 POLDIP2Q9Y2S7 368 aa15.99■□□□□ 0.15
TNFRSF1B-204ENST00000536782 LOC110117498-PIK3R3F6TDL0 507 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 DLGAP1O14490 977 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 NXPH2O95156 264 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 PAX6P26367 422 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 CEBPDP49716 269 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 ACTR3P61158 418 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 ESRRGP62508 458 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 TMEM42Q69YG0 159 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 ZNF322Q6U7Q0 402 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 LIAT1Q6ZQX7 453 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 C11orf42Q8N5U0 333 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 DTX3Q8N9I9 347 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 OR4M1Q8NGD0 313 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 PRRG3Q9BZD7 231 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 MOB1AQ9H8S9 216 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 GPR173Q9NS66 373 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 FOXJ3Q9UPW0 622 aa15.98■□□□□ 0.15
TNFRSF1B-204ENST00000536782 PQLC2LA1A4F0 135 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 PRKYO43930 277 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 SRSF10O75494 262 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 CCL3L1P16619 93 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 COX7A1P24310 79 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 ERVFRD-1P60508 538 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 CXCR4P61073 352 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 PTGES3Q15185 160 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 BCL2L15Q5TBC7 163 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 ASRGL1Q7L266 308 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 ELMOD2Q8IZ81 293 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 KLHDC1Q8N7A1 406 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 NRBF2Q96F24 287 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 APOL4Q9BPW4 351 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 NRIP2Q9BQI9 281 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 NPFFR1Q9GZQ6 430 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 H2AFY2Q9P0M6 372 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 OR14J1Q9UGF5 321 aa15.97■□□□□ 0.15
TNFRSF1B-204ENST00000536782 R4GMQ9 66 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms