RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 PIPP12273 146 aaPredicted RBP2.91□□□□□ -1.94
YBX3-205ENST00000536107 ACADSP16219 412 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 SDC1P18827 310 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 MSR1P21757 451 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 PEX2P28328 305 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 CHI3L1P36222 383 aaPredicted RBP2.91□□□□□ -1.94
YBX3-205ENST00000536107 MNDAP41218 407 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 RFX2P48378 723 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 RPL38P63173 70 aaKnown RBP2.91□□□□□ -1.94
YBX3-205ENST00000536107 HBA1P69905 142 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 SPIBQ01892 262 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 FMODQ06828 376 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 PIN1Q13526 163 aaPredicted RBP2.91□□□□□ -1.94
YBX3-205ENST00000536107 SYPL1Q16563 259 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 ALG10BQ5I7T1 473 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 C10orf128Q5T292 105 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 ATPAF1Q5TC12 328 aaPredicted RBP2.91□□□□□ -1.94
YBX3-205ENST00000536107 LIPMQ5VYY2 423 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 FAM91A1Q658Y4 838 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 LCN12Q6JVE5 192 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 FAM53AQ6NSI3 398 aaPredicted RBP2.91□□□□□ -1.94
YBX3-205ENST00000536107 TTC27Q6P3X3 843 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 CCDC137Q6PK04 289 aaKnown RBP2.91□□□□□ -1.94
YBX3-205ENST00000536107 DPY19L4Q7Z388 723 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 HDDC2Q7Z4H3 204 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 CCDC91Q7Z6B0 441 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 NKAIN4Q8IVV8 208 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 DPP10Q8N608 796 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 ZNRF1Q8ND25 227 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 OR11H6Q8NGC7 330 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 OR52L1Q8NGH7 329 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 OR4A15Q8NGL6 344 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 OR2T27Q8NH04 317 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 OR1F12Q8NHA8 337 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 NFKBIDQ8NI38 313 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 TRMT10AQ8TBZ6 339 aaKnown RBP2.91□□□□□ -1.94
YBX3-205ENST00000536107 TCP10LQ8TDR4 215 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 TMEM106AQ96A25 262 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 UBE2E2Q96LR5 201 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 TRNT1Q96Q11 434 aaKnown RBP2.91□□□□□ -1.94
YBX3-205ENST00000536107 CCT7Q99832 543 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 ERP44Q9BS26 406 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 GGTLC1Q9BX51 225 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 DNTTIP1Q9H147 329 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 ALX4Q9H161 411 aaPredicted RBP2.91□□□□□ -1.94
YBX3-205ENST00000536107 CCDC134Q9H6E4 229 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 SMURF2Q9HAU4 748 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 RNPEPL1Q9HAU8 725 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 SLCO1B3Q9NPD5 702 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 C1orf109Q9NX04 203 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 PTTG2Q9NZH5 202 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 ADA2Q9NZK5 511 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 MGAT4CQ9UBM8 478 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 ANGPT4Q9Y264 503 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 PIGLQ9Y2B2 252 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 UGT2A1Q9Y4X1 527 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 LRP2P98164 4655 aa2.9□□□□□ -1.94
YBX3-205ENST00000536107 IGKV1D-42A0A075B6H8 117 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 A0A1B0GWJ7 208 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 MEX3AA1L020 520 aaKnown RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 CD300LBA8K4G0 201 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 BLOC1S5-TXNDC5H3BN57 136 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 I3L521 148 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 LGALS9O00182 355 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 DNALI1O14645 258 aaPredicted RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 CDIPTO14735 213 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 PTP4A3O75365 173 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 TRMUO75648 421 aaKnown RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 CPSF4O95639 269 aaKnown RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 IFNA21P01568 189 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 IFNA17P01571 189 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 IGHG2P01859 326 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 NR2C1P13056 603 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 TMEM11P17152 192 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 TAC1P20366 129 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 IMPDH1P20839 514 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 SSTR1P30872 391 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 MDH1P40925 334 aaKnown RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 NPBWR2P48146 333 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 DAP3P51398 398 aaKnown RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 MFAP2P55001 183 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 PKNOX1P55347 436 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 ACTA2P62736 377 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 ACTG2P63267 376 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 ACTC1P68032 377 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 ACTA1P68133 377 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 FUT5Q11128 374 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 GK2Q14410 553 aaPredicted RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 KPNB1Q14974 876 aaKnown RBP2.9□□□□□ -1.95
YBX3-205ENST00000536107 HIST3H3Q16695 136 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 GALNTL6Q49A17 601 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 ZNF678Q5SXM1 525 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 LCN8Q6JVE9 175 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 CFAP77Q6ZQR2 320 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 LRRC74BQ6ZQY2 392 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 ZBTB49Q6ZSB9 765 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 ZBTB46Q86UZ6 589 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 SPARTQ8N0X7 666 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 CENPSQ8N2Z9 138 aa2.9□□□□□ -1.95
YBX3-205ENST00000536107 Q8N402 240 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms