RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 H0YGG7 62 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 CALUO43852 315 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 MYO1DO94832 1006 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 STAMBPO95630 424 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 OTCP00480 354 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 MYL2P10916 166 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 STOMP27105 288 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 SLC1A1P43005 524 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 VEGFCP49767 419 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 SNRPD2P62316 118 aaKnown RBP3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 NSUN5P1Q3KNT7 163 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 C22orf42Q6IC83 251 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 FAM151BQ6UXP7 276 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 BAIAP2L2Q6UXY1 529 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 Q6ZN92 141 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 PRSS41Q7RTY9 318 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 ACOT4Q8N9L9 421 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR10G3Q8NGC4 313 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 NEIL2Q969S2 332 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 PRRC1Q96M27 445 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 OXGR1Q96P68 337 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 PANX1Q96RD7 426 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 KLHDC3Q9BQ90 382 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 PAXXQ9BUH6 204 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 Q9H3A6 140 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 INPP5EQ9NRR6 644 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 DMAC2Q9NW81 257 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 TREM2Q9NZC2 230 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLCF1Q9UBD9 225 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 DNAJC12Q9UKB3 198 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 DOCK11Q5JSL3 2073 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 HEATR5BQ9P2D3 2071 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 IGHV3OR16-13A0A075B7E8 117 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 KBTBD11-OT1A0A1B0GTJ5 212 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 E7EQL1 145 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 H7C0C1 242 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 EMC8O43402 210 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF254O75437 659 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLPXO76031 633 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 TBX6O95947 436 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ACTL6AO96019 429 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 IL1RNP18510 177 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 TCN1P20061 433 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CD1BP29016 333 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CASQ1P31415 396 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 SDC4P31431 198 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 DEKP35659 375 aaKnown RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CDKN1BP46527 198 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CDK9P50750 372 aaKnown RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 BIDP55957 195 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLDN8P56748 225 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ADARB1P78563 741 aaKnown RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CXCL6P80162 114 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 STK38Q15208 465 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 TSC22D1Q15714 1073 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 STK11Q15831 433 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 Q1RN00 199 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 GSG1Q2KHT4 349 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 PTPN20Q4JDL3 420 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 GPR157Q5UAW9 335 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 MARC1Q5VT66 337 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 OPN5Q6U736 354 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 SASS6Q6UVJ0 657 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 SBSNQ6UWP8 590 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF571Q7Z3V5 609 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 PIANPQ8IYJ0 282 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR51S1Q8NGJ8 323 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR13F1Q8NGS4 319 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLDND2Q8NHS1 167 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 RHEBL1Q8TAI7 183 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 GPX8Q8TED1 209 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ISOC1Q96CN7 298 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 DCUN1D1Q96GG9 259 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CSPG4P5Q96PW8 444 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR8B4Q96RC9 309 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 LYSMD1Q96S90 227 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 IL22Q9GZX6 179 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 EHD1Q9H4M9 534 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ELOVL6Q9H5J4 265 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 UGT1A10Q9HAW8 530 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 TMEM165Q9HC07 324 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 LZTFL1Q9NQ48 299 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLN8Q9UBY8 286 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 TBC1D24Q9ULP9 559 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 ARHGAP32A7KAX9 2087 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 J3QLI3 93 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 TXNDC9O14530 226 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 GOSR2O14653 212 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 RAB29O14966 203 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 RDH16O75452 317 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 MPZL1O95297 269 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 C1orf105O95561 183 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 CGAP01215 116 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 S100A9P06702 114 aaKnown RBP3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR8U8P0C7N1 319 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 NPR2P20594 1047 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 PSMB5P28074 263 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 CD151P48509 253 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 CTBP2P56545 445 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms